Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,243,605	+		Pf1N1B4_1109	0.42	+0.0
1,244,064	+		Pf1N1B4_1109	0.74	-0.3
1,244,064	+		Pf1N1B4_1109	0.74	+0.6
1,244,064	+		Pf1N1B4_1109	0.74	+0.3
1,244,064	+		Pf1N1B4_1109	0.74	+0.9
1,244,064	+		Pf1N1B4_1109	0.74	-1.2
1,244,065	-		Pf1N1B4_1109	0.74	+2.5
1,244,065	-		Pf1N1B4_1109	0.74	+0.7
1,244,409	+				-0.4
1,244,409	+				-2.2
1,244,409	+				-2.2
1,244,409	+				+1.1
1,244,409	+				+0.3
1,244,409	+				+2.5
1,244,409	+				-1.2
1,244,409	+				+0.1
1,244,409	+				+0.8
1,244,409	+				-0.1
1,244,409	+				-0.1
1,244,409	+				+0.5
1,244,410	-				+0.1
1,244,410	-				-0.0
1,244,410	-				-1.2
1,244,410	-				+1.1
1,244,410	-				+0.6
1,244,410	-				-0.6
1,244,410	-				+0.9
1,244,498	+				-0.7
1,244,540	+				+1.1
1,244,591	+		Pf1N1B4_1110	0.10	+2.0
1,244,591	+		Pf1N1B4_1110	0.10	-0.4
1,244,592	-		Pf1N1B4_1110	0.10	+1.2
1,244,592	-		Pf1N1B4_1110	0.10	-0.2
1,244,592	-		Pf1N1B4_1110	0.10	+2.0
1,244,777	+		Pf1N1B4_1110	0.31	+0.1
1,244,778	-		Pf1N1B4_1110	0.31	-2.2
1,244,814	-				-0.4
1,244,843	+		Pf1N1B4_1110	0.38	+0.4
1,244,844	-		Pf1N1B4_1110	0.38	+1.4
1,244,988	-		Pf1N1B4_1110	0.54	+1.1
1,244,988	-		Pf1N1B4_1110	0.54	+0.9
1,244,988	-		Pf1N1B4_1110	0.54	+1.7
1,245,008	-		Pf1N1B4_1110	0.56	+0.7
1,245,068	+		Pf1N1B4_1110	0.63	+3.5
1,245,069	-		Pf1N1B4_1110	0.63	+2.3
1,245,069	-		Pf1N1B4_1110	0.63	+0.1
1,245,122	+		Pf1N1B4_1110	0.69	+1.1
1,245,123	-		Pf1N1B4_1110	0.69	+0.3
1,245,152	-		Pf1N1B4_1110	0.72	-0.2
1,245,311	+		Pf1N1B4_1110	0.89	+0.6
1,245,311	+		Pf1N1B4_1110	0.89	-0.9
1,245,427	-				+1.5
1,245,492	+				+0.4
1,245,546	-				+1.7
1,245,574	+				+0.7
1,245,574	+				+1.7
1,245,574	+				+0.1
1,245,574	+				+1.1
1,245,574	+				-0.7
1,245,574	+				+0.7
1,245,575	-				+0.4
1,245,575	-				-0.9
1,245,575	-				+0.1
1,245,575	-				-0.9
1,245,575	-				-1.6
1,245,575	-				-0.9
1,245,575	-				+0.1
1,245,595	+				+0.0
1,245,617	+				-0.0
1,245,617	+				-0.2
1,245,618	-				+0.1
1,245,621	+				-1.4
1,245,628	+				-0.1
1,245,628	+				-0.9
1,245,628	+				+1.7
1,245,628	+				-2.2
1,245,628	+				+1.7
1,245,628	+				-1.8
1,245,628	+				-2.4
1,245,629	-				-0.9
1,245,629	-				+0.7
1,245,629	-				-0.3
1,245,629	-				-0.4
1,245,629	-				+1.6
1,245,639	+				+0.4
1,245,640	-				-0.4
1,245,640	-				+1.1
1,245,654	+				+1.1
1,245,656	+				+0.9
1,245,677	-				-1.4
1,245,928	-		Pf1N1B4_1111	0.22	-0.9
1,245,928	-		Pf1N1B4_1111	0.22	-1.9
1,245,928	-				+0.1
1,245,940	-		Pf1N1B4_1111	0.22	-0.2
1,245,962	+		Pf1N1B4_1111	0.24	-0.1
1,245,962	+				-0.9
1,245,963	-		Pf1N1B4_1111	0.24	+1.3
1,246,058	-		Pf1N1B4_1111	0.31	+1.3
1,246,190	+		Pf1N1B4_1111	0.41	-0.4
1,246,191	-		Pf1N1B4_1111	0.41	-0.1
1,246,191	-				-0.9
1,246,207	+		Pf1N1B4_1111	0.43	+0.1
1,246,207	+		Pf1N1B4_1111	0.43	-1.9
1,246,208	-		Pf1N1B4_1111	0.43	+1.5
1,246,208	-		Pf1N1B4_1111	0.43	-0.4
1,246,337	+		Pf1N1B4_1111	0.53	-0.3
1,246,337	+		Pf1N1B4_1111	0.53	+2.7
1,246,337	+		Pf1N1B4_1111	0.53	+0.9
1,246,337	+		Pf1N1B4_1111	0.53	+1.1
1,246,337	+		Pf1N1B4_1111	0.53	-0.3
1,246,338	-				+2.1