Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1011

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,146,080	+		Pf1N1B4_1010	0.67	+0.1
1,146,080	+		Pf1N1B4_1010	0.67	+0.4
1,146,080	+		Pf1N1B4_1010	0.67	-0.9
1,146,080	+		Pf1N1B4_1010	0.67	-0.4
1,146,080	+		Pf1N1B4_1010	0.67	-0.2
1,146,080	+		Pf1N1B4_1010	0.67	+0.6
1,146,081	-		Pf1N1B4_1010	0.67	+1.9
1,146,125	+		Pf1N1B4_1010	0.69	+0.5
1,146,125	+		Pf1N1B4_1010	0.69	+0.8
1,146,125	+		Pf1N1B4_1010	0.69	-0.7
1,146,126	-		Pf1N1B4_1010	0.69	+2.7
1,146,188	+		Pf1N1B4_1010	0.71	-0.9
1,146,189	-		Pf1N1B4_1010	0.71	-1.2
1,146,326	+		Pf1N1B4_1010	0.77	+0.6
1,146,326	+		Pf1N1B4_1010	0.77	+1.0
1,146,404	+		Pf1N1B4_1010	0.81	-0.0
1,146,405	-		Pf1N1B4_1010	0.81	+2.1
1,146,450	-		Pf1N1B4_1010	0.83	+1.5
1,146,458	+		Pf1N1B4_1010	0.83	+0.1
1,146,458	+		Pf1N1B4_1010	0.83	+1.7
1,146,458	+		Pf1N1B4_1010	0.83	+0.9
1,146,458	+		Pf1N1B4_1010	0.83	-0.8
1,146,458	+		Pf1N1B4_1010	0.83	-1.1
1,146,458	+		Pf1N1B4_1010	0.83	-0.2
1,146,458	+		Pf1N1B4_1010	0.83	+1.4
1,146,459	-		Pf1N1B4_1010	0.83	+1.1
1,146,459	-				-1.5
1,146,459	-		Pf1N1B4_1010	0.83	-0.2
1,146,459	-		Pf1N1B4_1010	0.83	+1.9
1,146,464	+				+0.1
1,146,464	+		Pf1N1B4_1010	0.83	-0.1
1,146,465	-		Pf1N1B4_1010	0.83	+0.7
1,146,465	-		Pf1N1B4_1010	0.83	+0.1
1,146,465	-		Pf1N1B4_1010	0.83	+0.1
1,146,465	-		Pf1N1B4_1010	0.83	-2.2
1,146,465	-		Pf1N1B4_1010	0.83	+0.4
1,146,465	-		Pf1N1B4_1010	0.83	+0.6
1,146,593	+		Pf1N1B4_1010	0.89	-0.6
1,146,594	-		Pf1N1B4_1010	0.89	+0.3
1,146,594	-		Pf1N1B4_1010	0.89	+0.9
1,146,594	-		Pf1N1B4_1010	0.89	+0.1
1,146,671	+				+1.1
1,146,671	+				+0.1
1,146,671	+				+0.8
1,146,671	+				-1.9
1,146,671	+				-1.5
1,146,672	-				-1.3
1,146,672	-				+0.8
1,146,679	-				+1.7
1,146,698	+				+3.1
1,146,698	+				+1.6
1,146,698	+				+0.5
1,146,699	-				-0.9
1,146,699	-				+0.7
1,146,767	+				+0.1
1,146,767	+				+1.2
1,146,767	+				+0.4
1,146,767	+				-1.1
1,146,767	+				-0.1
1,146,767	+				-0.2
1,146,768	-				+2.4
1,146,768	-				+0.3
1,146,806	+				-0.1
1,146,806	+				+0.1
1,146,806	+				+0.7
1,146,806	+				-0.1
1,146,806	+				+1.4
1,146,806	+				-1.2
1,146,806	+				+1.1
1,146,806	+				+0.7
1,146,807	-				+2.0
1,146,807	-				-0.9
1,146,807	-				+0.3
1,146,807	-				+2.1
1,146,807	-				-0.0
1,146,830	+				-0.3
1,146,830	+				-1.7
1,146,830	+				-1.5
1,146,830	+				+0.7
1,146,830	+				+0.1
1,146,830	+				-0.9
1,146,830	+				+0.5
1,146,830	+				+0.7
1,146,830	+				-0.6
1,146,830	+				-1.1
1,146,830	+				-0.6
1,146,830	+				+0.6
1,146,830	+				+0.1
1,146,830	+				+0.6
1,146,830	+				+2.4
1,146,831	-				+1.7
1,146,831	-				+0.1
1,146,831	-				+1.1
1,146,831	-				-0.9
1,146,831	-				-1.5
1,146,831	-				+2.1
1,146,831	-				+2.1
1,146,831	-				+0.7
1,146,831	-				+2.0
1,146,831	-				-0.1
1,146,923	+				+0.1
1,146,923	+				+0.3
1,146,924	-				+1.1
1,146,943	+				+1.9
1,146,944	-				+0.7
1,146,984	-				-0.2
1,146,984	-				+0.1
1,146,984	-				-0.5
1,146,989	+				+0.4
1,146,989	+				+0.1
1,146,990	-				+0.1
1,146,990	-				+1.1
1,147,186	-		Pf1N1B4_1011	0.46	+0.5
1,147,314	-		Pf1N1B4_1011	0.77	+0.4
1,147,314	-		Pf1N1B4_1011	0.77	+1.3
1,147,338	+		Pf1N1B4_1011	0.83	+2.3
1,147,338	+		Pf1N1B4_1011	0.83	+1.1
1,147,341	+		Pf1N1B4_1011	0.84	+2.1
1,147,341	+		Pf1N1B4_1011	0.84	+0.1
1,147,341	+		Pf1N1B4_1011	0.84	-1.5
1,147,341	+		Pf1N1B4_1011	0.84	-0.9
1,147,341	+		Pf1N1B4_1011	0.84	+1.7
1,147,341	+		Pf1N1B4_1011	0.84	-0.5
1,147,342	-		Pf1N1B4_1011	0.84	-0.5
1,147,342	-		Pf1N1B4_1011	0.84	+0.1
1,147,342	-				+0.7
1,147,342	-		Pf1N1B4_1011	0.84	+0.9
1,147,342	-		Pf1N1B4_1011	0.84	-0.2
1,147,342	-		Pf1N1B4_1011	0.84	+0.1
1,147,346	-		Pf1N1B4_1011	0.85	+0.9
1,147,377	+				-0.9
1,147,407	+				+0.8
1,147,408	-				-0.3
1,147,408	-				+0.8
1,147,408	-				-0.3
1,147,408	-				+1.2
1,147,408	-				+0.2
1,147,408	-				+0.1
1,147,408	-				-0.3
1,147,408	-				+0.5
1,147,420	-				-0.1
1,147,420	-				+0.6
1,147,420	-				+0.8
1,147,429	-				+1.1
1,147,429	-				+0.3
1,147,429	-				+1.4
1,147,536	-				+1.4
1,147,578	+				-0.2
1,147,656	+				+1.1
1,147,657	-				+0.1
1,147,657	-				-0.1
1,147,664	-				-1.9
1,147,664	-				+1.7
1,147,664	-				-0.5
1,147,866	+		Pf1N1B4_1012	0.26	+0.1
1,147,890	+		Pf1N1B4_1012	0.28	+0.6
1,147,891	-		Pf1N1B4_1012	0.28	+0.5
1,147,937	+		Pf1N1B4_1012	0.33	-0.5
1,147,937	+		Pf1N1B4_1012	0.33	+0.1
1,147,937	+		Pf1N1B4_1012	0.33	+0.9
1,147,938	-		Pf1N1B4_1012	0.33	+1.7
1,147,938	-		Pf1N1B4_1012	0.33	+0.1
1,147,938	-		Pf1N1B4_1012	0.33	-0.1
1,147,956	-		Pf1N1B4_1012	0.35	-1.5
1,147,961	+		Pf1N1B4_1012	0.36	-0.3
1,147,962	-		Pf1N1B4_1012	0.36	+0.1
1,148,071	+				-1.5
1,148,072	-		Pf1N1B4_1012	0.47	-0.6
1,148,072	-		Pf1N1B4_1012	0.47	+1.1
1,148,072	-				+0.7