Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_620 and Ac3H11_621 are separated by 152 nucleotides Ac3H11_621 and Ac3H11_622 are separated by 665 nucleotides
Ac3H11_620 - Transcriptional regulator, TetR family, at 59,314 to 59,898
_620
Ac3H11_621 - Thioredoxin reductase (EC 1.8.1.9), at 60,051 to 60,944
_621
Ac3H11_622 - Transcriptional regulator, LysR family, at 61,610 to 62,554
_622
Position (kb)
60
61 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 59.053 kb on - strand at 59.053 kb on - strand at 59.053 kb on - strand at 59.113 kb on - strand at 59.175 kb on + strand at 59.175 kb on + strand at 59.175 kb on + strand at 59.176 kb on - strand at 59.176 kb on - strand at 59.222 kb on + strand at 59.222 kb on + strand at 59.223 kb on - strand at 59.334 kb on + strand at 59.334 kb on + strand at 59.335 kb on - strand at 59.335 kb on - strand at 59.401 kb on + strand, within Ac3H11_620 at 59.401 kb on + strand, within Ac3H11_620 at 59.401 kb on + strand, within Ac3H11_620 at 59.401 kb on + strand, within Ac3H11_620 at 59.402 kb on - strand, within Ac3H11_620 at 59.402 kb on - strand, within Ac3H11_620 at 59.402 kb on - strand, within Ac3H11_620 at 59.402 kb on - strand, within Ac3H11_620 at 59.426 kb on - strand, within Ac3H11_620 at 59.426 kb on - strand, within Ac3H11_620 at 59.426 kb on - strand, within Ac3H11_620 at 59.508 kb on - strand, within Ac3H11_620 at 59.542 kb on + strand, within Ac3H11_620 at 59.542 kb on + strand, within Ac3H11_620 at 59.592 kb on - strand, within Ac3H11_620 at 59.783 kb on + strand, within Ac3H11_620 at 59.783 kb on + strand, within Ac3H11_620 at 59.784 kb on - strand, within Ac3H11_620 at 59.784 kb on - strand, within Ac3H11_620 at 59.960 kb on + strand at 59.962 kb on + strand at 59.963 kb on - strand at 59.963 kb on - strand at 59.986 kb on + strand at 59.986 kb on + strand at 59.987 kb on - strand at 59.989 kb on - strand at 59.989 kb on - strand at 59.989 kb on - strand at 59.990 kb on + strand at 60.001 kb on - strand at 60.370 kb on - strand, within Ac3H11_621 at 60.370 kb on - strand, within Ac3H11_621 at 60.370 kb on - strand, within Ac3H11_621 at 60.779 kb on + strand, within Ac3H11_621 at 60.840 kb on + strand, within Ac3H11_621 at 60.840 kb on + strand, within Ac3H11_621 at 60.841 kb on - strand, within Ac3H11_621 at 60.841 kb on - strand, within Ac3H11_621 at 60.932 kb on + strand at 60.987 kb on - strand at 60.987 kb on - strand at 61.042 kb on + strand at 61.042 kb on + strand at 61.042 kb on + strand at 61.042 kb on + strand at 61.043 kb on - strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.046 kb on + strand at 61.047 kb on - strand at 61.047 kb on - strand at 61.047 kb on - strand at 61.047 kb on - strand at 61.047 kb on - strand at 61.047 kb on - strand at 61.047 kb on - strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.050 kb on + strand at 61.051 kb on - strand at 61.051 kb on - strand at 61.051 kb on - strand at 61.051 kb on - strand at 61.051 kb on - strand at 61.051 kb on - strand at 61.051 kb on - strand at 61.084 kb on + strand at 61.084 kb on + strand at 61.084 kb on + strand at 61.085 kb on - strand at 61.092 kb on + strand at 61.092 kb on + strand at 61.093 kb on - strand at 61.093 kb on - strand at 61.093 kb on - strand at 61.179 kb on - strand at 61.179 kb on - strand at 61.179 kb on - strand at 61.345 kb on + strand at 61.351 kb on + strand at 61.351 kb on + strand at 61.351 kb on + strand at 61.351 kb on + strand at 61.352 kb on - strand at 61.369 kb on + strand at 61.369 kb on + strand at 61.369 kb on + strand at 61.369 kb on + strand at 61.369 kb on + strand at 61.370 kb on - strand at 61.370 kb on - strand at 61.433 kb on + strand at 61.434 kb on - strand at 61.456 kb on + strand at 61.457 kb on - strand at 61.520 kb on - strand at 61.528 kb on + strand at 61.528 kb on + strand at 61.528 kb on + strand at 61.528 kb on + strand at 61.528 kb on + strand at 61.529 kb on - strand at 61.529 kb on - strand at 61.529 kb on - strand at 61.529 kb on - strand at 61.529 kb on - strand at 61.542 kb on - strand at 61.542 kb on - strand at 61.542 kb on - strand at 61.599 kb on - strand at 61.599 kb on - strand at 61.599 kb on - strand at 61.690 kb on - strand at 61.702 kb on - strand at 61.707 kb on + strand, within Ac3H11_622 at 61.716 kb on + strand, within Ac3H11_622 at 61.716 kb on + strand, within Ac3H11_622 at 61.716 kb on + strand, within Ac3H11_622 at 61.716 kb on + strand, within Ac3H11_622 at 61.717 kb on - strand, within Ac3H11_622 at 61.717 kb on - strand, within Ac3H11_622 at 61.807 kb on + strand, within Ac3H11_622 at 61.807 kb on + strand, within Ac3H11_622 at 61.807 kb on + strand, within Ac3H11_622 at 61.808 kb on - strand, within Ac3H11_622 at 61.848 kb on + strand, within Ac3H11_622 at 61.936 kb on - strand, within Ac3H11_622
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 59,053 - -1.1 59,053 - -2.6 59,053 - -0.1 59,113 - -1.4 59,175 + -1.5 59,175 + +0.8 59,175 + -0.5 59,176 - +0.3 59,176 - +0.1 59,222 + -0.6 59,222 + -0.2 59,223 - +1.7 59,334 + +0.2 59,334 + -1.5 59,335 - +0.3 59,335 - +0.5 59,401 + Ac3H11_620 0.15 +0.6 59,401 + Ac3H11_620 0.15 +0.4 59,401 + Ac3H11_620 0.15 -1.2 59,401 + Ac3H11_620 0.15 +1.6 59,402 - Ac3H11_620 0.15 -2.2 59,402 - Ac3H11_620 0.15 +1.0 59,402 - Ac3H11_620 0.15 +0.1 59,402 - Ac3H11_620 0.15 -1.2 59,426 - Ac3H11_620 0.19 -1.3 59,426 - Ac3H11_620 0.19 -0.1 59,426 - Ac3H11_620 0.19 -0.3 59,508 - Ac3H11_620 0.33 -2.4 59,542 + Ac3H11_620 0.39 +1.3 59,542 + Ac3H11_620 0.39 -1.3 59,592 - Ac3H11_620 0.48 -1.5 59,783 + Ac3H11_620 0.80 +0.3 59,783 + Ac3H11_620 0.80 -1.5 59,784 - Ac3H11_620 0.80 -2.5 59,784 - Ac3H11_620 0.80 -0.5 59,960 + +0.5 59,962 + -0.3 59,963 - +0.3 59,963 - +1.3 59,986 + +0.1 59,986 + -1.4 59,987 - +1.1 59,989 - +0.8 59,989 - +0.5 59,989 - +0.8 59,990 + -0.4 60,001 - +0.9 60,370 - Ac3H11_621 0.36 -0.1 60,370 - Ac3H11_621 0.36 -0.4 60,370 - Ac3H11_621 0.36 -2.5 60,779 + Ac3H11_621 0.81 -1.3 60,840 + Ac3H11_621 0.88 -1.1 60,840 + Ac3H11_621 0.88 -0.5 60,841 - Ac3H11_621 0.88 -2.9 60,841 - Ac3H11_621 0.88 -0.2 60,932 + +0.9 60,987 - -0.3 60,987 - -0.0 61,042 + +0.2 61,042 + +0.6 61,042 + +1.1 61,042 + -0.5 61,043 - -0.5 61,046 + +1.1 61,046 + +0.8 61,046 + +0.5 61,046 + +1.6 61,046 + +1.1 61,046 + -0.9 61,046 + -1.3 61,046 + -0.1 61,046 + -1.1 61,047 - -0.6 61,047 - +1.1 61,047 - -1.7 61,047 - +1.6 61,047 - -0.4 61,047 - +1.1 61,047 - +0.4 61,050 + +0.1 61,050 + -0.5 61,050 + -0.5 61,050 + -2.1 61,050 + -1.0 61,050 + +0.5 61,050 + +0.1 61,050 + -0.6 61,050 + -0.7 61,051 - +2.0 61,051 - -0.3 61,051 - -1.6 61,051 - +1.6 61,051 - +0.1 61,051 - -1.7 61,051 - +0.3 61,084 + -2.3 61,084 + +0.1 61,084 + -0.4 61,085 - -0.8 61,092 + +0.1 61,092 + +0.6 61,093 - -0.8 61,093 - -1.0 61,093 - +0.5 61,179 - +1.2 61,179 - -0.8 61,179 - +1.0 61,345 + +0.2 61,351 + -1.0 61,351 + +0.5 61,351 + -0.5 61,351 + +0.1 61,352 - -0.0 61,369 + +1.7 61,369 + -1.3 61,369 + +0.9 61,369 + -1.5 61,369 + +0.6 61,370 - -1.9 61,370 - -1.4 61,433 + +1.4 61,434 - +0.5 61,456 + -1.2 61,457 - +1.0 61,520 - +0.1 61,528 + +0.5 61,528 + +2.6 61,528 + -0.5 61,528 + +0.3 61,528 + -1.8 61,529 - -0.2 61,529 - +1.0 61,529 - +2.2 61,529 - -1.9 61,529 - -0.5 61,542 - -0.6 61,542 - -0.0 61,542 - +0.1 61,599 - +0.8 61,599 - -0.9 61,599 - -1.5 61,690 - -1.1 61,702 - -0.9 61,707 + Ac3H11_622 0.10 -1.3 61,716 + Ac3H11_622 0.11 -0.5 61,716 + Ac3H11_622 0.11 -2.5 61,716 + Ac3H11_622 0.11 -0.8 61,716 + Ac3H11_622 0.11 +1.2 61,717 - Ac3H11_622 0.11 -0.7 61,717 - Ac3H11_622 0.11 +0.2 61,807 + Ac3H11_622 0.21 -0.4 61,807 + Ac3H11_622 0.21 -0.3 61,807 + Ac3H11_622 0.21 -1.8 61,808 - Ac3H11_622 0.21 +1.5 61,848 + Ac3H11_622 0.25 -0.1 61,936 - Ac3H11_622 0.34 -1.5
Or see this region's nucleotide sequence