Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4554 and Ac3H11_4555 are separated by 89 nucleotides Ac3H11_4555 and Ac3H11_4556 overlap by 4 nucleotides
Ac3H11_4554 - Permease of the drug/metabolite transporter (DMT) superfamily, at 145,263 to 146,201
_4554
Ac3H11_4555 - Bona fide RidA/YjgF/TdcF/RutC subgroup, at 146,291 to 146,695
_4555
Ac3H11_4556 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 146,692 to 148,353
_4556
Position (kb)
146
147 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 145.335 kb on + strand at 145.335 kb on + strand at 145.335 kb on + strand at 145.335 kb on + strand at 145.335 kb on + strand at 145.336 kb on - strand at 145.336 kb on - strand at 145.336 kb on - strand at 145.336 kb on - strand at 145.336 kb on - strand at 145.336 kb on - strand at 145.356 kb on + strand at 145.357 kb on - strand, within Ac3H11_4554 at 145.786 kb on - strand, within Ac3H11_4554 at 145.786 kb on - strand, within Ac3H11_4554 at 145.786 kb on - strand, within Ac3H11_4554 at 145.786 kb on - strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.938 kb on + strand, within Ac3H11_4554 at 145.939 kb on - strand, within Ac3H11_4554 at 145.939 kb on - strand, within Ac3H11_4554 at 145.939 kb on - strand, within Ac3H11_4554 at 145.978 kb on - strand, within Ac3H11_4554 at 145.978 kb on - strand, within Ac3H11_4554 at 145.978 kb on - strand, within Ac3H11_4554 at 146.022 kb on + strand, within Ac3H11_4554 at 146.022 kb on + strand, within Ac3H11_4554 at 146.023 kb on - strand, within Ac3H11_4554 at 146.023 kb on - strand, within Ac3H11_4554 at 146.142 kb on + strand at 146.181 kb on + strand at 146.199 kb on + strand at 146.199 kb on + strand at 146.199 kb on + strand at 146.203 kb on - strand at 146.203 kb on - strand at 147.017 kb on + strand, within Ac3H11_4556 at 147.056 kb on + strand, within Ac3H11_4556 at 147.057 kb on - strand, within Ac3H11_4556 at 147.066 kb on - strand, within Ac3H11_4556 at 147.102 kb on - strand, within Ac3H11_4556 at 147.122 kb on + strand, within Ac3H11_4556 at 147.122 kb on + strand, within Ac3H11_4556 at 147.122 kb on + strand, within Ac3H11_4556 at 147.122 kb on + strand, within Ac3H11_4556 at 147.122 kb on + strand, within Ac3H11_4556 at 147.122 kb on + strand, within Ac3H11_4556 at 147.123 kb on - strand, within Ac3H11_4556 at 147.123 kb on - strand, within Ac3H11_4556 at 147.123 kb on - strand, within Ac3H11_4556 at 147.123 kb on - strand, within Ac3H11_4556 at 147.123 kb on - strand, within Ac3H11_4556 at 147.123 kb on - strand, within Ac3H11_4556 at 147.150 kb on - strand, within Ac3H11_4556 at 147.462 kb on - strand, within Ac3H11_4556 at 147.479 kb on + strand, within Ac3H11_4556 at 147.480 kb on - strand, within Ac3H11_4556 at 147.480 kb on - strand, within Ac3H11_4556 at 147.533 kb on + strand, within Ac3H11_4556 at 147.533 kb on + strand, within Ac3H11_4556 at 147.552 kb on - strand, within Ac3H11_4556 at 147.658 kb on + strand, within Ac3H11_4556 at 147.658 kb on + strand, within Ac3H11_4556 at 147.658 kb on + strand, within Ac3H11_4556 at 147.658 kb on + strand, within Ac3H11_4556 at 147.659 kb on - strand, within Ac3H11_4556 at 147.659 kb on - strand, within Ac3H11_4556 at 147.659 kb on - strand, within Ac3H11_4556 at 147.659 kb on - strand, within Ac3H11_4556 at 147.659 kb on - strand, within Ac3H11_4556 at 147.659 kb on - strand, within Ac3H11_4556
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 145,335 + +0.0 145,335 + -0.4 145,335 + -1.7 145,335 + +0.6 145,335 + -0.4 145,336 - -0.2 145,336 - +0.1 145,336 - +0.6 145,336 - +0.5 145,336 - +0.5 145,336 - +0.2 145,356 + +0.4 145,357 - Ac3H11_4554 0.10 -0.3 145,786 - Ac3H11_4554 0.56 +0.2 145,786 - Ac3H11_4554 0.56 -4.0 145,786 - Ac3H11_4554 0.56 +1.8 145,786 - Ac3H11_4554 0.56 -0.6 145,938 + Ac3H11_4554 0.72 -0.6 145,938 + Ac3H11_4554 0.72 -1.3 145,938 + Ac3H11_4554 0.72 -1.2 145,938 + Ac3H11_4554 0.72 -0.0 145,938 + Ac3H11_4554 0.72 +1.2 145,938 + Ac3H11_4554 0.72 -0.4 145,938 + Ac3H11_4554 0.72 -1.0 145,939 - Ac3H11_4554 0.72 +0.6 145,939 - Ac3H11_4554 0.72 -1.6 145,939 - Ac3H11_4554 0.72 -0.9 145,978 - Ac3H11_4554 0.76 -0.8 145,978 - Ac3H11_4554 0.76 +0.8 145,978 - Ac3H11_4554 0.76 +0.1 146,022 + Ac3H11_4554 0.81 +0.3 146,022 + Ac3H11_4554 0.81 -0.5 146,023 - Ac3H11_4554 0.81 +0.4 146,023 - Ac3H11_4554 0.81 +0.2 146,142 + -0.1 146,181 + -2.1 146,199 + +2.2 146,199 + -2.4 146,199 + -0.9 146,203 - -0.6 146,203 - -0.5 147,017 + Ac3H11_4556 0.20 +0.1 147,056 + Ac3H11_4556 0.22 +0.3 147,057 - Ac3H11_4556 0.22 +0.0 147,066 - Ac3H11_4556 0.23 -0.2 147,102 - Ac3H11_4556 0.25 -0.3 147,122 + Ac3H11_4556 0.26 +1.1 147,122 + Ac3H11_4556 0.26 -1.1 147,122 + Ac3H11_4556 0.26 -0.6 147,122 + Ac3H11_4556 0.26 +0.4 147,122 + Ac3H11_4556 0.26 -1.6 147,122 + Ac3H11_4556 0.26 +0.2 147,123 - Ac3H11_4556 0.26 -0.1 147,123 - Ac3H11_4556 0.26 -0.2 147,123 - Ac3H11_4556 0.26 -0.5 147,123 - Ac3H11_4556 0.26 -0.3 147,123 - Ac3H11_4556 0.26 +0.4 147,123 - Ac3H11_4556 0.26 -0.0 147,150 - Ac3H11_4556 0.28 -0.7 147,462 - Ac3H11_4556 0.46 -1.0 147,479 + Ac3H11_4556 0.47 -0.3 147,480 - Ac3H11_4556 0.47 -0.6 147,480 - Ac3H11_4556 0.47 +1.4 147,533 + Ac3H11_4556 0.51 -0.9 147,533 + Ac3H11_4556 0.51 +0.9 147,552 - Ac3H11_4556 0.52 -0.6 147,658 + Ac3H11_4556 0.58 +1.7 147,658 + Ac3H11_4556 0.58 +0.3 147,658 + Ac3H11_4556 0.58 +1.3 147,658 + Ac3H11_4556 0.58 +0.6 147,659 - Ac3H11_4556 0.58 -1.4 147,659 - Ac3H11_4556 0.58 -1.6 147,659 - Ac3H11_4556 0.58 -1.4 147,659 - Ac3H11_4556 0.58 +0.4 147,659 - Ac3H11_4556 0.58 -0.3 147,659 - Ac3H11_4556 0.58 -1.0
Or see this region's nucleotide sequence