Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3609 and Ac3H11_3610 are separated by 90 nucleotides Ac3H11_3610 and Ac3H11_3611 overlap by 4 nucleotides Ac3H11_3611 and Ac3H11_3612 are separated by 10 nucleotides Ac3H11_3612 and Ac3H11_3613 overlap by 4 nucleotides
Ac3H11_3609 - Transcriptional regulator, IclR family, at 161,777 to 162,529
_3609
Ac3H11_3610 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 162,620 to 163,465
_3610
Ac3H11_3611 - Monooxygenase, flavin-binding family, at 163,462 to 164,796
_3611
Ac3H11_3612 - Na(+) dependent transporter,Sodium Bile acid symporter family, at 164,807 to 165,742
_3612
Ac3H11_3613 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 165,739 to 166,749
_3613
Position (kb) 163
164
165 Strain fitness (log2 ratio) -2
-1
0
1
2 at 162.785 kb on + strand, within Ac3H11_3610 at 162.785 kb on + strand, within Ac3H11_3610 at 162.785 kb on + strand, within Ac3H11_3610 at 162.785 kb on + strand, within Ac3H11_3610 at 162.815 kb on - strand, within Ac3H11_3610 at 162.815 kb on - strand, within Ac3H11_3610 at 162.869 kb on - strand, within Ac3H11_3610 at 163.169 kb on + strand, within Ac3H11_3610 at 163.169 kb on + strand, within Ac3H11_3610 at 163.645 kb on + strand, within Ac3H11_3611 at 163.645 kb on + strand, within Ac3H11_3611 at 163.645 kb on + strand, within Ac3H11_3611 at 163.646 kb on - strand, within Ac3H11_3611 at 163.646 kb on - strand, within Ac3H11_3611 at 163.750 kb on + strand, within Ac3H11_3611 at 163.750 kb on + strand, within Ac3H11_3611 at 163.792 kb on + strand, within Ac3H11_3611 at 163.997 kb on - strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.087 kb on - strand, within Ac3H11_3611 at 164.122 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.126 kb on - strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.141 kb on - strand, within Ac3H11_3611 at 164.141 kb on - strand at 164.141 kb on - strand, within Ac3H11_3611 at 164.276 kb on - strand, within Ac3H11_3611 at 164.284 kb on + strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.414 kb on - strand, within Ac3H11_3611 at 164.441 kb on - strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.453 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.591 kb on - strand, within Ac3H11_3611 at 164.711 kb on - strand at 164.734 kb on + strand at 164.735 kb on - strand at 164.737 kb on + strand at 164.737 kb on + strand at 164.737 kb on + strand at 164.738 kb on - strand at 164.738 kb on - strand at 164.756 kb on - strand at 164.826 kb on + strand at 164.826 kb on + strand at 164.827 kb on - strand at 165.036 kb on + strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.525 kb on - strand, within Ac3H11_3612
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 162,785 + Ac3H11_3610 0.20 -2.6 162,785 + Ac3H11_3610 0.20 -0.0 162,785 + Ac3H11_3610 0.20 -1.8 162,785 + Ac3H11_3610 0.20 -0.3 162,815 - Ac3H11_3610 0.23 +0.4 162,815 - Ac3H11_3610 0.23 -0.3 162,869 - Ac3H11_3610 0.29 -2.3 163,169 + Ac3H11_3610 0.65 -1.3 163,169 + Ac3H11_3610 0.65 +0.9 163,645 + Ac3H11_3611 0.14 +1.3 163,645 + Ac3H11_3611 0.14 -2.2 163,645 + Ac3H11_3611 0.14 +0.3 163,646 - Ac3H11_3611 0.14 -0.5 163,646 - Ac3H11_3611 0.14 -1.1 163,750 + Ac3H11_3611 0.22 -0.7 163,750 + Ac3H11_3611 0.22 +0.6 163,792 + Ac3H11_3611 0.25 +0.2 163,997 - Ac3H11_3611 0.40 -0.7 164,086 + Ac3H11_3611 0.47 +1.4 164,086 + Ac3H11_3611 0.47 +0.9 164,087 - Ac3H11_3611 0.47 +1.3 164,122 + Ac3H11_3611 0.49 -0.5 164,125 + Ac3H11_3611 0.50 -1.1 164,125 + Ac3H11_3611 0.50 -0.6 164,125 + Ac3H11_3611 0.50 -1.1 164,125 + Ac3H11_3611 0.50 +0.6 164,125 + Ac3H11_3611 0.50 -0.1 164,126 - Ac3H11_3611 0.50 +0.7 164,140 + Ac3H11_3611 0.51 +0.5 164,140 + Ac3H11_3611 0.51 +1.0 164,140 + Ac3H11_3611 0.51 +1.1 164,140 + Ac3H11_3611 0.51 +1.5 164,140 + Ac3H11_3611 0.51 -0.0 164,140 + Ac3H11_3611 0.51 +0.0 164,141 - Ac3H11_3611 0.51 +0.6 164,141 - +0.1 164,141 - Ac3H11_3611 0.51 +1.3 164,276 - Ac3H11_3611 0.61 -0.9 164,284 + Ac3H11_3611 0.62 +0.9 164,285 - Ac3H11_3611 0.62 -1.7 164,285 - Ac3H11_3611 0.62 -0.1 164,285 - Ac3H11_3611 0.62 +0.3 164,285 - Ac3H11_3611 0.62 +0.8 164,413 + Ac3H11_3611 0.71 +0.2 164,413 + Ac3H11_3611 0.71 -0.6 164,414 - Ac3H11_3611 0.71 -1.1 164,441 - Ac3H11_3611 0.73 -0.5 164,452 + Ac3H11_3611 0.74 -0.6 164,452 + Ac3H11_3611 0.74 -0.0 164,453 - Ac3H11_3611 0.74 -1.3 164,507 - Ac3H11_3611 0.78 -1.3 164,507 - Ac3H11_3611 0.78 +1.0 164,507 - Ac3H11_3611 0.78 -2.3 164,591 - Ac3H11_3611 0.85 -2.6 164,711 - -0.8 164,734 + +0.7 164,735 - +1.3 164,737 + +0.9 164,737 + -1.7 164,737 + +0.8 164,738 - -1.0 164,738 - -0.2 164,756 - +0.3 164,826 + +0.1 164,826 + +1.5 164,827 - +0.8 165,036 + Ac3H11_3612 0.24 +0.8 165,037 - Ac3H11_3612 0.25 -1.0 165,037 - Ac3H11_3612 0.25 -1.0 165,037 - Ac3H11_3612 0.25 -0.4 165,432 - Ac3H11_3612 0.67 -0.9 165,432 - Ac3H11_3612 0.67 +2.0 165,432 - Ac3H11_3612 0.67 +0.6 165,432 - Ac3H11_3612 0.67 +2.2 165,525 - Ac3H11_3612 0.77 -0.3
Or see this region's nucleotide sequence