Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3394 and Ac3H11_3395 are separated by 20 nucleotides Ac3H11_3395 and Ac3H11_3396 are separated by 17 nucleotides Ac3H11_3396 and Ac3H11_3397 are separated by 44 nucleotides Ac3H11_3397 and Ac3H11_3398 are separated by 54 nucleotides
Ac3H11_3394 - hypothetical protein, at 72,622 to 72,789
_3394
Ac3H11_3395 - alpha/beta hydrolase fold, at 72,810 to 73,448
_3395
Ac3H11_3396 - ProQ: influences osmotic activation of compatible solute ProP, at 73,466 to 74,437
_3396
Ac3H11_3397 - Conserved domain protein, at 74,482 to 75,096
_3397
Ac3H11_3398 - Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF, at 75,151 to 76,404
_3398
Position (kb) 73
74
75 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 72.759 kb on - strand, within Ac3H11_3394 at 72.777 kb on + strand at 72.778 kb on - strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.849 kb on - strand at 73.121 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.179 kb on + strand, within Ac3H11_3395 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.751 kb on + strand, within Ac3H11_3396 at 73.764 kb on + strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.864 kb on - strand, within Ac3H11_3396 at 73.966 kb on - strand, within Ac3H11_3396 at 74.483 kb on + strand at 74.484 kb on - strand at 74.484 kb on - strand at 74.484 kb on - strand at 74.634 kb on - strand, within Ac3H11_3397 at 74.634 kb on - strand, within Ac3H11_3397 at 74.634 kb on - strand, within Ac3H11_3397 at 74.634 kb on - strand, within Ac3H11_3397 at 74.756 kb on + strand, within Ac3H11_3397 at 74.794 kb on + strand, within Ac3H11_3397 at 74.794 kb on + strand, within Ac3H11_3397 at 74.795 kb on - strand, within Ac3H11_3397 at 74.941 kb on + strand, within Ac3H11_3397 at 74.942 kb on - strand, within Ac3H11_3397 at 75.133 kb on - strand at 75.320 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.348 kb on - strand, within Ac3H11_3398
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 72,759 - Ac3H11_3394 0.82 +1.1 72,777 + -3.7 72,778 - +0.1 72,848 + +0.8 72,848 + -0.8 72,848 + -1.8 72,848 + +0.3 72,849 - -1.4 73,121 + Ac3H11_3395 0.49 -1.2 73,165 + Ac3H11_3395 0.56 -0.0 73,165 + Ac3H11_3395 0.56 -0.2 73,165 + Ac3H11_3395 0.56 +0.8 73,165 + Ac3H11_3395 0.56 +1.7 73,179 + Ac3H11_3395 0.58 -0.1 73,614 + Ac3H11_3396 0.15 -0.3 73,614 + Ac3H11_3396 0.15 -2.2 73,614 + Ac3H11_3396 0.15 +0.8 73,614 + Ac3H11_3396 0.15 -0.8 73,614 + Ac3H11_3396 0.15 +0.3 73,614 + Ac3H11_3396 0.15 -1.8 73,614 + Ac3H11_3396 0.15 -1.8 73,614 + Ac3H11_3396 0.15 -0.0 73,614 + Ac3H11_3396 0.15 -1.0 73,615 - Ac3H11_3396 0.15 -0.6 73,615 - Ac3H11_3396 0.15 -1.6 73,615 - Ac3H11_3396 0.15 -0.0 73,615 - Ac3H11_3396 0.15 -0.4 73,615 - Ac3H11_3396 0.15 -0.5 73,615 - Ac3H11_3396 0.15 +0.0 73,751 + Ac3H11_3396 0.29 -3.0 73,764 + Ac3H11_3396 0.31 -0.6 73,765 - Ac3H11_3396 0.31 -0.1 73,765 - Ac3H11_3396 0.31 -1.2 73,765 - Ac3H11_3396 0.31 -0.3 73,864 - Ac3H11_3396 0.41 -0.5 73,966 - Ac3H11_3396 0.51 -0.8 74,483 + +1.4 74,484 - +0.5 74,484 - +0.5 74,484 - +0.5 74,634 - Ac3H11_3397 0.25 -1.0 74,634 - Ac3H11_3397 0.25 +2.2 74,634 - Ac3H11_3397 0.25 -0.7 74,634 - Ac3H11_3397 0.25 -0.2 74,756 + Ac3H11_3397 0.45 -1.4 74,794 + Ac3H11_3397 0.51 +1.3 74,794 + Ac3H11_3397 0.51 +1.6 74,795 - Ac3H11_3397 0.51 -1.1 74,941 + Ac3H11_3397 0.75 -2.3 74,942 - Ac3H11_3397 0.75 -0.4 75,133 - -0.0 75,320 + Ac3H11_3398 0.13 -0.9 75,347 + Ac3H11_3398 0.16 -0.1 75,347 + Ac3H11_3398 0.16 -0.7 75,347 + Ac3H11_3398 0.16 +0.1 75,347 + Ac3H11_3398 0.16 -1.9 75,347 + Ac3H11_3398 0.16 +0.8 75,347 + Ac3H11_3398 0.16 +0.1 75,348 - Ac3H11_3398 0.16 +1.0
Or see this region's nucleotide sequence