Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3129 and Ac3H11_3130 are separated by 13 nucleotides Ac3H11_3130 and Ac3H11_3131 overlap by 43 nucleotides Ac3H11_3131 and Ac3H11_3132 are separated by 18 nucleotides
Ac3H11_3129 - SAM-dependent methyltransferase (EC 2.1.1.-), at 31,476 to 32,111
_3129
Ac3H11_3130 - Ferredoxin, at 32,125 to 32,421
_3130
Ac3H11_3131 - hypothetical protein, at 32,379 to 32,789
_3131
Ac3H11_3132 - 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25), at 32,808 to 33,929
_3132
Position (kb)
32
33 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 31.132 kb on - strand at 31.138 kb on + strand at 31.138 kb on + strand at 31.138 kb on + strand at 31.138 kb on + strand at 31.139 kb on - strand at 31.142 kb on + strand at 31.143 kb on - strand at 31.143 kb on - strand at 31.143 kb on - strand at 31.164 kb on + strand at 31.165 kb on - strand at 31.285 kb on + strand at 31.304 kb on + strand at 31.304 kb on + strand at 31.305 kb on - strand at 31.305 kb on - strand at 31.315 kb on + strand at 31.315 kb on + strand at 31.315 kb on + strand at 31.315 kb on + strand at 31.315 kb on + strand at 31.315 kb on + strand at 31.315 kb on + strand at 31.316 kb on - strand at 31.316 kb on - strand at 31.316 kb on - strand at 31.337 kb on + strand at 31.337 kb on + strand at 31.389 kb on + strand at 31.390 kb on - strand at 31.390 kb on - strand at 31.390 kb on - strand at 31.390 kb on - strand at 31.447 kb on + strand at 31.800 kb on + strand, within Ac3H11_3129 at 31.800 kb on + strand, within Ac3H11_3129 at 31.800 kb on + strand, within Ac3H11_3129 at 31.800 kb on + strand, within Ac3H11_3129 at 31.800 kb on + strand, within Ac3H11_3129 at 31.801 kb on - strand, within Ac3H11_3129 at 31.801 kb on - strand, within Ac3H11_3129 at 31.899 kb on + strand, within Ac3H11_3129 at 31.899 kb on + strand, within Ac3H11_3129 at 31.899 kb on + strand, within Ac3H11_3129 at 31.899 kb on + strand, within Ac3H11_3129 at 31.899 kb on + strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.900 kb on - strand, within Ac3H11_3129 at 31.909 kb on - strand, within Ac3H11_3129 at 32.180 kb on + strand, within Ac3H11_3130 at 32.180 kb on + strand, within Ac3H11_3130 at 32.180 kb on + strand, within Ac3H11_3130 at 32.180 kb on + strand, within Ac3H11_3130 at 32.180 kb on + strand, within Ac3H11_3130 at 32.180 kb on + strand, within Ac3H11_3130 at 32.180 kb on + strand, within Ac3H11_3130 at 32.181 kb on - strand, within Ac3H11_3130 at 32.181 kb on - strand, within Ac3H11_3130 at 32.181 kb on - strand, within Ac3H11_3130 at 32.181 kb on - strand, within Ac3H11_3130 at 32.311 kb on + strand, within Ac3H11_3130 at 32.312 kb on - strand, within Ac3H11_3130 at 32.312 kb on - strand, within Ac3H11_3130 at 32.471 kb on + strand, within Ac3H11_3131 at 32.577 kb on + strand, within Ac3H11_3131 at 32.577 kb on + strand, within Ac3H11_3131 at 32.577 kb on + strand, within Ac3H11_3131 at 32.644 kb on + strand, within Ac3H11_3131 at 32.644 kb on + strand, within Ac3H11_3131 at 32.644 kb on + strand, within Ac3H11_3131 at 32.644 kb on + strand, within Ac3H11_3131 at 33.069 kb on + strand, within Ac3H11_3132 at 33.069 kb on + strand, within Ac3H11_3132
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 31,132 - -0.5 31,138 + -0.4 31,138 + +0.5 31,138 + -1.0 31,138 + -0.3 31,139 - +0.3 31,142 + +0.9 31,143 - +0.1 31,143 - -0.7 31,143 - -2.9 31,164 + +0.7 31,165 - -0.3 31,285 + +0.2 31,304 + +0.3 31,304 + +1.3 31,305 - -0.6 31,305 - -1.3 31,315 + -1.0 31,315 + +1.4 31,315 + +0.5 31,315 + -0.7 31,315 + +0.5 31,315 + -1.5 31,315 + +0.6 31,316 - -1.3 31,316 - -0.2 31,316 - +0.1 31,337 + +0.8 31,337 + -2.1 31,389 + +1.7 31,390 - +0.4 31,390 - -0.6 31,390 - +0.7 31,390 - -1.4 31,447 + +0.9 31,800 + Ac3H11_3129 0.51 -1.6 31,800 + Ac3H11_3129 0.51 -0.9 31,800 + Ac3H11_3129 0.51 +0.7 31,800 + Ac3H11_3129 0.51 +0.2 31,800 + Ac3H11_3129 0.51 +0.2 31,801 - Ac3H11_3129 0.51 -1.0 31,801 - Ac3H11_3129 0.51 -2.1 31,899 + Ac3H11_3129 0.67 +0.4 31,899 + Ac3H11_3129 0.67 +0.0 31,899 + Ac3H11_3129 0.67 +1.9 31,899 + Ac3H11_3129 0.67 -0.0 31,899 + Ac3H11_3129 0.67 +0.7 31,900 - Ac3H11_3129 0.67 +0.7 31,900 - Ac3H11_3129 0.67 -1.1 31,900 - Ac3H11_3129 0.67 -1.0 31,900 - Ac3H11_3129 0.67 -1.3 31,900 - Ac3H11_3129 0.67 +0.1 31,900 - Ac3H11_3129 0.67 -1.3 31,900 - Ac3H11_3129 0.67 -0.9 31,900 - Ac3H11_3129 0.67 +0.4 31,909 - Ac3H11_3129 0.68 -0.5 32,180 + Ac3H11_3130 0.19 -0.3 32,180 + Ac3H11_3130 0.19 -1.9 32,180 + Ac3H11_3130 0.19 +1.4 32,180 + Ac3H11_3130 0.19 +0.5 32,180 + Ac3H11_3130 0.19 -0.6 32,180 + Ac3H11_3130 0.19 -0.8 32,180 + Ac3H11_3130 0.19 -1.4 32,181 - Ac3H11_3130 0.19 -0.3 32,181 - Ac3H11_3130 0.19 -0.0 32,181 - Ac3H11_3130 0.19 +0.0 32,181 - Ac3H11_3130 0.19 -0.2 32,311 + Ac3H11_3130 0.63 -1.1 32,312 - Ac3H11_3130 0.63 -0.7 32,312 - Ac3H11_3130 0.63 -0.1 32,471 + Ac3H11_3131 0.22 +2.4 32,577 + Ac3H11_3131 0.48 +0.9 32,577 + Ac3H11_3131 0.48 -0.7 32,577 + Ac3H11_3131 0.48 +1.1 32,644 + Ac3H11_3131 0.64 +0.2 32,644 + Ac3H11_3131 0.64 +0.1 32,644 + Ac3H11_3131 0.64 +1.2 32,644 + Ac3H11_3131 0.64 -1.0 33,069 + Ac3H11_3132 0.23 +0.2 33,069 + Ac3H11_3132 0.23 +0.6
Or see this region's nucleotide sequence