Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2877 and Ac3H11_2878 are separated by 169 nucleotides Ac3H11_2878 and Ac3H11_2879 are separated by 322 nucleotides
Ac3H11_2877 - Nucleoside-diphosphate-sugar epimerases, at 1,186,129 to 1,187,295
_2877
Ac3H11_2878 - Inosose isomerase (EC 5.3.99.-), at 1,187,465 to 1,188,478
_2878
Ac3H11_2879 - Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1), at 1,188,801 to 1,189,778
_2879
Position (kb)
1187
1188
1189 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1186.759 kb on + strand, within Ac3H11_2877 at 1186.787 kb on + strand, within Ac3H11_2877 at 1186.787 kb on + strand, within Ac3H11_2877 at 1186.788 kb on - strand, within Ac3H11_2877 at 1186.871 kb on + strand, within Ac3H11_2877 at 1186.871 kb on + strand, within Ac3H11_2877 at 1186.872 kb on - strand, within Ac3H11_2877 at 1186.872 kb on - strand, within Ac3H11_2877 at 1186.872 kb on - strand, within Ac3H11_2877 at 1186.872 kb on - strand, within Ac3H11_2877 at 1186.877 kb on + strand, within Ac3H11_2877 at 1186.877 kb on + strand, within Ac3H11_2877 at 1186.877 kb on + strand, within Ac3H11_2877 at 1186.877 kb on + strand, within Ac3H11_2877 at 1186.877 kb on + strand, within Ac3H11_2877 at 1186.878 kb on - strand, within Ac3H11_2877 at 1187.267 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.295 kb on + strand at 1187.296 kb on - strand at 1187.784 kb on + strand, within Ac3H11_2878 at 1187.784 kb on + strand, within Ac3H11_2878 at 1187.784 kb on + strand, within Ac3H11_2878 at 1187.784 kb on + strand, within Ac3H11_2878 at 1187.785 kb on - strand, within Ac3H11_2878 at 1187.821 kb on - strand, within Ac3H11_2878 at 1187.821 kb on - strand, within Ac3H11_2878 at 1187.836 kb on - strand, within Ac3H11_2878 at 1187.856 kb on + strand, within Ac3H11_2878 at 1187.856 kb on + strand, within Ac3H11_2878 at 1187.856 kb on + strand, within Ac3H11_2878 at 1187.857 kb on - strand, within Ac3H11_2878 at 1187.857 kb on - strand, within Ac3H11_2878 at 1187.857 kb on - strand, within Ac3H11_2878 at 1188.033 kb on + strand, within Ac3H11_2878 at 1188.034 kb on - strand, within Ac3H11_2878 at 1188.034 kb on - strand, within Ac3H11_2878 at 1188.034 kb on - strand, within Ac3H11_2878 at 1188.034 kb on - strand, within Ac3H11_2878 at 1188.060 kb on + strand, within Ac3H11_2878 at 1188.324 kb on + strand, within Ac3H11_2878 at 1188.324 kb on + strand, within Ac3H11_2878 at 1188.325 kb on - strand, within Ac3H11_2878 at 1188.325 kb on - strand, within Ac3H11_2878 at 1188.325 kb on - strand, within Ac3H11_2878 at 1188.393 kb on + strand at 1188.594 kb on - strand at 1188.716 kb on + strand at 1188.717 kb on - strand at 1188.824 kb on - strand at 1188.824 kb on - strand at 1188.931 kb on + strand, within Ac3H11_2879 at 1188.931 kb on + strand, within Ac3H11_2879 at 1188.931 kb on + strand, within Ac3H11_2879 at 1188.932 kb on - strand, within Ac3H11_2879 at 1188.949 kb on + strand, within Ac3H11_2879 at 1189.138 kb on + strand, within Ac3H11_2879 at 1189.183 kb on + strand, within Ac3H11_2879 at 1189.321 kb on + strand, within Ac3H11_2879 at 1189.322 kb on - strand, within Ac3H11_2879 at 1189.366 kb on + strand, within Ac3H11_2879 at 1189.366 kb on + strand, within Ac3H11_2879 at 1189.367 kb on - strand, within Ac3H11_2879 at 1189.367 kb on - strand, within Ac3H11_2879 at 1189.417 kb on + strand, within Ac3H11_2879 at 1189.417 kb on + strand, within Ac3H11_2879 at 1189.417 kb on + strand, within Ac3H11_2879 at 1189.417 kb on + strand, within Ac3H11_2879 at 1189.417 kb on + strand, within Ac3H11_2879 at 1189.418 kb on - strand, within Ac3H11_2879
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 1,186,759 + Ac3H11_2877 0.54 +0.4 1,186,787 + Ac3H11_2877 0.56 -0.8 1,186,787 + Ac3H11_2877 0.56 -0.9 1,186,788 - Ac3H11_2877 0.56 +1.2 1,186,871 + Ac3H11_2877 0.64 +0.4 1,186,871 + Ac3H11_2877 0.64 +0.2 1,186,872 - Ac3H11_2877 0.64 +0.2 1,186,872 - Ac3H11_2877 0.64 +0.7 1,186,872 - Ac3H11_2877 0.64 +1.0 1,186,872 - Ac3H11_2877 0.64 -0.4 1,186,877 + Ac3H11_2877 0.64 -2.0 1,186,877 + Ac3H11_2877 0.64 +0.1 1,186,877 + Ac3H11_2877 0.64 -1.0 1,186,877 + Ac3H11_2877 0.64 -0.5 1,186,877 + Ac3H11_2877 0.64 -0.7 1,186,878 - Ac3H11_2877 0.64 +0.9 1,187,267 + +0.0 1,187,295 + -1.5 1,187,295 + +0.2 1,187,295 + +1.1 1,187,295 + +1.4 1,187,295 + -0.6 1,187,295 + +0.3 1,187,295 + -2.2 1,187,295 + -1.7 1,187,296 - -3.2 1,187,784 + Ac3H11_2878 0.31 +0.0 1,187,784 + Ac3H11_2878 0.31 -1.3 1,187,784 + Ac3H11_2878 0.31 +0.2 1,187,784 + Ac3H11_2878 0.31 -0.8 1,187,785 - Ac3H11_2878 0.32 -0.0 1,187,821 - Ac3H11_2878 0.35 +0.7 1,187,821 - Ac3H11_2878 0.35 -0.3 1,187,836 - Ac3H11_2878 0.37 -2.3 1,187,856 + Ac3H11_2878 0.39 -0.8 1,187,856 + Ac3H11_2878 0.39 +0.5 1,187,856 + Ac3H11_2878 0.39 +0.2 1,187,857 - Ac3H11_2878 0.39 -0.8 1,187,857 - Ac3H11_2878 0.39 -0.3 1,187,857 - Ac3H11_2878 0.39 +0.7 1,188,033 + Ac3H11_2878 0.56 +0.3 1,188,034 - Ac3H11_2878 0.56 +2.1 1,188,034 - Ac3H11_2878 0.56 +0.7 1,188,034 - Ac3H11_2878 0.56 +0.2 1,188,034 - Ac3H11_2878 0.56 -0.9 1,188,060 + Ac3H11_2878 0.59 +0.4 1,188,324 + Ac3H11_2878 0.85 -0.1 1,188,324 + Ac3H11_2878 0.85 +0.1 1,188,325 - Ac3H11_2878 0.85 +0.5 1,188,325 - Ac3H11_2878 0.85 +0.2 1,188,325 - Ac3H11_2878 0.85 +2.0 1,188,393 + +0.1 1,188,594 - -0.8 1,188,716 + +0.3 1,188,717 - +0.0 1,188,824 - -1.8 1,188,824 - +0.4 1,188,931 + Ac3H11_2879 0.13 -0.5 1,188,931 + Ac3H11_2879 0.13 -0.6 1,188,931 + Ac3H11_2879 0.13 -1.3 1,188,932 - Ac3H11_2879 0.13 +2.2 1,188,949 + Ac3H11_2879 0.15 +1.0 1,189,138 + Ac3H11_2879 0.34 +0.3 1,189,183 + Ac3H11_2879 0.39 -1.1 1,189,321 + Ac3H11_2879 0.53 +0.1 1,189,322 - Ac3H11_2879 0.53 +0.3 1,189,366 + Ac3H11_2879 0.58 -0.2 1,189,366 + Ac3H11_2879 0.58 +0.2 1,189,367 - Ac3H11_2879 0.58 +0.4 1,189,367 - Ac3H11_2879 0.58 +1.2 1,189,417 + Ac3H11_2879 0.63 +0.3 1,189,417 + Ac3H11_2879 0.63 -0.5 1,189,417 + Ac3H11_2879 0.63 +0.4 1,189,417 + Ac3H11_2879 0.63 +0.5 1,189,417 + Ac3H11_2879 0.63 -1.6 1,189,418 - Ac3H11_2879 0.63 -0.6
Or see this region's nucleotide sequence