Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2831 and Ac3H11_2832 are separated by 254 nucleotides Ac3H11_2832 and Ac3H11_2833 are separated by 112 nucleotides Ac3H11_2833 and Ac3H11_2834 are separated by 15 nucleotides Ac3H11_2834 and Ac3H11_2835 are separated by 322 nucleotides
Ac3H11_2831 - Isocitrate lyase (EC 4.1.3.1) (from data) , at 1,137,897 to 1,139,228
_2831
Ac3H11_2832 - hypothetical protein, at 1,139,483 to 1,139,911
_2832
Ac3H11_2833 - Permease of the drug/metabolite transporter (DMT) superfamily, at 1,140,024 to 1,140,986
_2833
Ac3H11_2834 - Ribonuclease E inhibitor RraA, at 1,141,002 to 1,141,514
_2834
Ac3H11_2835 - DNA topoisomerase III (EC 5.99.1.2), at 1,141,837 to 1,142,157
_2835
Position (kb)
1140
1141 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 1139.125 kb on + strand at 1139.125 kb on + strand at 1139.125 kb on + strand at 1139.304 kb on + strand at 1139.332 kb on + strand at 1139.369 kb on + strand at 1139.550 kb on + strand, within Ac3H11_2832 at 1139.550 kb on + strand, within Ac3H11_2832 at 1139.550 kb on + strand, within Ac3H11_2832 at 1139.550 kb on + strand, within Ac3H11_2832 at 1139.551 kb on - strand, within Ac3H11_2832 at 1139.551 kb on - strand, within Ac3H11_2832 at 1139.551 kb on - strand, within Ac3H11_2832 at 1139.551 kb on - strand, within Ac3H11_2832 at 1139.551 kb on - strand, within Ac3H11_2832 at 1139.551 kb on - strand, within Ac3H11_2832 at 1139.568 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.625 kb on + strand, within Ac3H11_2832 at 1139.626 kb on - strand, within Ac3H11_2832 at 1139.626 kb on - strand, within Ac3H11_2832 at 1139.626 kb on - strand, within Ac3H11_2832 at 1139.626 kb on - strand, within Ac3H11_2832 at 1139.626 kb on - strand, within Ac3H11_2832 at 1139.697 kb on + strand, within Ac3H11_2832 at 1139.697 kb on + strand, within Ac3H11_2832 at 1139.697 kb on + strand, within Ac3H11_2832 at 1139.697 kb on + strand, within Ac3H11_2832 at 1139.697 kb on + strand, within Ac3H11_2832 at 1139.698 kb on - strand, within Ac3H11_2832 at 1139.698 kb on - strand, within Ac3H11_2832 at 1139.698 kb on - strand, within Ac3H11_2832 at 1139.698 kb on - strand, within Ac3H11_2832 at 1139.760 kb on + strand, within Ac3H11_2832 at 1139.760 kb on + strand, within Ac3H11_2832 at 1139.760 kb on + strand, within Ac3H11_2832 at 1139.760 kb on + strand, within Ac3H11_2832 at 1139.760 kb on + strand, within Ac3H11_2832 at 1139.760 kb on + strand, within Ac3H11_2832 at 1139.761 kb on - strand, within Ac3H11_2832 at 1139.761 kb on - strand, within Ac3H11_2832 at 1139.853 kb on + strand, within Ac3H11_2832 at 1139.984 kb on + strand at 1139.984 kb on + strand at 1139.984 kb on + strand at 1139.984 kb on + strand at 1139.984 kb on + strand at 1139.984 kb on + strand at 1139.985 kb on - strand at 1139.985 kb on - strand at 1139.985 kb on - strand at 1139.985 kb on - strand at 1139.985 kb on - strand at 1139.992 kb on + strand at 1139.993 kb on - strand at 1139.993 kb on - strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.022 kb on + strand at 1140.023 kb on - strand at 1140.023 kb on - strand at 1140.023 kb on - strand at 1140.023 kb on - strand at 1140.051 kb on + strand at 1140.051 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.090 kb on + strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.091 kb on - strand at 1140.288 kb on + strand, within Ac3H11_2833 at 1140.288 kb on + strand, within Ac3H11_2833 at 1140.288 kb on + strand, within Ac3H11_2833 at 1140.288 kb on + strand, within Ac3H11_2833 at 1140.288 kb on + strand, within Ac3H11_2833 at 1140.289 kb on - strand, within Ac3H11_2833 at 1140.289 kb on - strand, within Ac3H11_2833 at 1140.289 kb on - strand, within Ac3H11_2833 at 1140.289 kb on - strand, within Ac3H11_2833 at 1140.564 kb on + strand, within Ac3H11_2833 at 1140.564 kb on + strand, within Ac3H11_2833 at 1140.564 kb on + strand, within Ac3H11_2833 at 1140.564 kb on + strand, within Ac3H11_2833 at 1140.565 kb on - strand, within Ac3H11_2833 at 1140.565 kb on - strand, within Ac3H11_2833 at 1140.667 kb on - strand, within Ac3H11_2833 at 1140.729 kb on + strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1140.730 kb on - strand, within Ac3H11_2833 at 1141.051 kb on + strand at 1141.051 kb on + strand at 1141.052 kb on - strand at 1141.052 kb on - strand at 1141.141 kb on - strand, within Ac3H11_2834 at 1141.141 kb on - strand, within Ac3H11_2834 at 1141.141 kb on - strand, within Ac3H11_2834 at 1141.212 kb on + strand, within Ac3H11_2834 at 1141.212 kb on + strand, within Ac3H11_2834 at 1141.296 kb on + strand, within Ac3H11_2834 at 1141.296 kb on + strand, within Ac3H11_2834 at 1141.296 kb on + strand, within Ac3H11_2834 at 1141.296 kb on + strand, within Ac3H11_2834 at 1141.296 kb on + strand, within Ac3H11_2834 at 1141.296 kb on + strand, within Ac3H11_2834 at 1141.297 kb on - strand, within Ac3H11_2834 at 1141.297 kb on - strand, within Ac3H11_2834 at 1141.297 kb on - strand, within Ac3H11_2834 at 1141.297 kb on - strand, within Ac3H11_2834 at 1141.297 kb on - strand, within Ac3H11_2834 at 1141.297 kb on - strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.408 kb on + strand, within Ac3H11_2834 at 1141.409 kb on - strand, within Ac3H11_2834 at 1141.409 kb on - strand, within Ac3H11_2834 at 1141.409 kb on - strand, within Ac3H11_2834 at 1141.409 kb on - strand, within Ac3H11_2834 at 1141.409 kb on - strand, within Ac3H11_2834 at 1141.409 kb on - strand, within Ac3H11_2834 at 1141.514 kb on + strand at 1141.514 kb on + strand at 1141.514 kb on + strand at 1141.514 kb on + strand at 1141.515 kb on - strand at 1141.515 kb on - strand at 1141.515 kb on - strand at 1141.515 kb on - strand at 1141.515 kb on - strand at 1141.515 kb on - strand at 1141.515 kb on - strand at 1141.765 kb on + strand at 1141.765 kb on + strand at 1141.765 kb on + strand at 1141.765 kb on + strand at 1141.765 kb on + strand at 1141.765 kb on + strand at 1141.766 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 1,139,125 + -1.4 1,139,125 + -0.4 1,139,125 + -0.9 1,139,304 + -1.5 1,139,332 + +0.2 1,139,369 + -3.0 1,139,550 + Ac3H11_2832 0.16 -1.8 1,139,550 + Ac3H11_2832 0.16 -1.5 1,139,550 + Ac3H11_2832 0.16 +0.6 1,139,550 + Ac3H11_2832 0.16 -2.7 1,139,551 - Ac3H11_2832 0.16 -0.1 1,139,551 - Ac3H11_2832 0.16 -0.8 1,139,551 - Ac3H11_2832 0.16 +1.3 1,139,551 - Ac3H11_2832 0.16 +0.8 1,139,551 - Ac3H11_2832 0.16 -0.9 1,139,551 - Ac3H11_2832 0.16 -0.9 1,139,568 + Ac3H11_2832 0.20 -0.3 1,139,625 + Ac3H11_2832 0.33 +2.7 1,139,625 + Ac3H11_2832 0.33 -1.7 1,139,625 + Ac3H11_2832 0.33 -0.3 1,139,625 + Ac3H11_2832 0.33 +0.1 1,139,625 + Ac3H11_2832 0.33 +0.9 1,139,625 + Ac3H11_2832 0.33 +1.3 1,139,625 + Ac3H11_2832 0.33 +0.2 1,139,625 + Ac3H11_2832 0.33 -0.9 1,139,626 - Ac3H11_2832 0.33 -0.5 1,139,626 - Ac3H11_2832 0.33 +2.1 1,139,626 - Ac3H11_2832 0.33 +0.8 1,139,626 - Ac3H11_2832 0.33 -0.3 1,139,626 - Ac3H11_2832 0.33 -2.3 1,139,697 + Ac3H11_2832 0.50 -1.3 1,139,697 + Ac3H11_2832 0.50 -1.7 1,139,697 + Ac3H11_2832 0.50 -1.1 1,139,697 + Ac3H11_2832 0.50 -1.0 1,139,697 + Ac3H11_2832 0.50 -0.1 1,139,698 - Ac3H11_2832 0.50 +1.2 1,139,698 - Ac3H11_2832 0.50 -1.2 1,139,698 - Ac3H11_2832 0.50 +2.2 1,139,698 - Ac3H11_2832 0.50 -2.5 1,139,760 + Ac3H11_2832 0.65 +0.0 1,139,760 + Ac3H11_2832 0.65 +0.3 1,139,760 + Ac3H11_2832 0.65 -0.7 1,139,760 + Ac3H11_2832 0.65 -1.1 1,139,760 + Ac3H11_2832 0.65 -2.6 1,139,760 + Ac3H11_2832 0.65 +0.6 1,139,761 - Ac3H11_2832 0.65 -1.6 1,139,761 - Ac3H11_2832 0.65 -1.9 1,139,853 + Ac3H11_2832 0.86 +0.4 1,139,984 + -0.9 1,139,984 + -0.4 1,139,984 + -1.8 1,139,984 + +0.2 1,139,984 + +1.1 1,139,984 + +0.4 1,139,985 - -0.1 1,139,985 - +0.5 1,139,985 - -1.1 1,139,985 - -0.4 1,139,985 - -0.5 1,139,992 + +0.3 1,139,993 - +1.3 1,139,993 - +1.5 1,140,022 + +0.9 1,140,022 + -0.6 1,140,022 + -0.7 1,140,022 + +0.7 1,140,022 + +0.7 1,140,022 + +0.6 1,140,022 + -0.2 1,140,022 + -0.9 1,140,023 - +1.1 1,140,023 - +0.1 1,140,023 - -1.8 1,140,023 - +0.9 1,140,051 + -0.9 1,140,051 + +0.7 1,140,090 + -1.5 1,140,090 + +4.2 1,140,090 + +2.2 1,140,090 + -1.2 1,140,090 + -1.6 1,140,090 + +0.2 1,140,090 + -0.9 1,140,090 + -3.0 1,140,090 + -1.6 1,140,090 + -0.6 1,140,090 + +0.5 1,140,090 + -0.1 1,140,090 + +0.5 1,140,090 + +0.5 1,140,090 + -0.7 1,140,090 + -1.3 1,140,090 + -0.8 1,140,090 + -0.2 1,140,090 + -1.3 1,140,090 + +0.5 1,140,090 + +0.3 1,140,090 + -0.0 1,140,090 + -0.0 1,140,090 + -3.8 1,140,090 + -0.4 1,140,090 + -0.9 1,140,090 + +0.7 1,140,091 - +1.5 1,140,091 - +0.4 1,140,091 - -0.2 1,140,091 - +1.1 1,140,091 - -0.8 1,140,091 - +0.7 1,140,091 - +1.5 1,140,091 - -0.6 1,140,091 - +0.5 1,140,091 - +1.5 1,140,091 - -0.8 1,140,091 - -0.8 1,140,091 - +0.5 1,140,091 - +0.5 1,140,091 - +0.5 1,140,091 - -0.4 1,140,091 - -0.2 1,140,091 - -0.7 1,140,288 + Ac3H11_2833 0.27 +0.2 1,140,288 + Ac3H11_2833 0.27 -0.3 1,140,288 + Ac3H11_2833 0.27 +0.7 1,140,288 + Ac3H11_2833 0.27 -2.0 1,140,288 + Ac3H11_2833 0.27 +0.6 1,140,289 - Ac3H11_2833 0.28 +1.5 1,140,289 - Ac3H11_2833 0.28 -0.4 1,140,289 - Ac3H11_2833 0.28 +1.8 1,140,289 - Ac3H11_2833 0.28 -0.8 1,140,564 + Ac3H11_2833 0.56 +1.5 1,140,564 + Ac3H11_2833 0.56 -0.0 1,140,564 + Ac3H11_2833 0.56 +0.1 1,140,564 + Ac3H11_2833 0.56 -2.0 1,140,565 - Ac3H11_2833 0.56 +0.5 1,140,565 - Ac3H11_2833 0.56 +0.8 1,140,667 - Ac3H11_2833 0.67 -0.1 1,140,729 + Ac3H11_2833 0.73 +0.3 1,140,730 - Ac3H11_2833 0.73 -0.0 1,140,730 - Ac3H11_2833 0.73 -0.8 1,140,730 - Ac3H11_2833 0.73 -1.2 1,140,730 - Ac3H11_2833 0.73 -1.6 1,140,730 - Ac3H11_2833 0.73 -1.0 1,140,730 - Ac3H11_2833 0.73 -0.5 1,140,730 - Ac3H11_2833 0.73 +1.0 1,140,730 - Ac3H11_2833 0.73 -0.6 1,141,051 + -0.3 1,141,051 + -0.1 1,141,052 - -0.7 1,141,052 - -0.3 1,141,141 - Ac3H11_2834 0.27 -0.7 1,141,141 - Ac3H11_2834 0.27 +1.2 1,141,141 - Ac3H11_2834 0.27 -0.6 1,141,212 + Ac3H11_2834 0.41 -0.7 1,141,212 + Ac3H11_2834 0.41 -0.3 1,141,296 + Ac3H11_2834 0.57 +0.4 1,141,296 + Ac3H11_2834 0.57 -0.2 1,141,296 + Ac3H11_2834 0.57 +0.9 1,141,296 + Ac3H11_2834 0.57 +0.2 1,141,296 + Ac3H11_2834 0.57 -0.9 1,141,296 + Ac3H11_2834 0.57 -1.2 1,141,297 - Ac3H11_2834 0.58 +0.9 1,141,297 - Ac3H11_2834 0.58 +0.4 1,141,297 - Ac3H11_2834 0.58 +0.2 1,141,297 - Ac3H11_2834 0.58 -0.0 1,141,297 - Ac3H11_2834 0.58 +0.7 1,141,297 - Ac3H11_2834 0.58 +0.6 1,141,408 + Ac3H11_2834 0.79 -2.5 1,141,408 + Ac3H11_2834 0.79 -0.5 1,141,408 + Ac3H11_2834 0.79 +0.1 1,141,408 + Ac3H11_2834 0.79 +0.5 1,141,408 + Ac3H11_2834 0.79 +0.4 1,141,408 + Ac3H11_2834 0.79 +2.4 1,141,408 + Ac3H11_2834 0.79 +0.1 1,141,408 + Ac3H11_2834 0.79 +0.5 1,141,408 + Ac3H11_2834 0.79 +0.3 1,141,408 + Ac3H11_2834 0.79 +1.3 1,141,408 + Ac3H11_2834 0.79 +0.2 1,141,408 + Ac3H11_2834 0.79 +1.1 1,141,408 + Ac3H11_2834 0.79 -0.6 1,141,408 + Ac3H11_2834 0.79 +0.7 1,141,409 - Ac3H11_2834 0.79 -0.3 1,141,409 - Ac3H11_2834 0.79 -0.0 1,141,409 - Ac3H11_2834 0.79 -0.6 1,141,409 - Ac3H11_2834 0.79 +0.9 1,141,409 - Ac3H11_2834 0.79 +0.9 1,141,409 - Ac3H11_2834 0.79 -0.3 1,141,514 + -1.9 1,141,514 + -2.0 1,141,514 + +0.9 1,141,514 + +0.0 1,141,515 - +0.3 1,141,515 - +0.7 1,141,515 - -1.0 1,141,515 - -0.0 1,141,515 - +1.1 1,141,515 - -0.3 1,141,515 - -1.2 1,141,765 + -0.8 1,141,765 + +1.3 1,141,765 + -1.9 1,141,765 + -1.5 1,141,765 + +0.4 1,141,765 + -1.5 1,141,766 - -1.4
Or see this region's nucleotide sequence