Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2753 and Ac3H11_2754 are separated by 6 nucleotides Ac3H11_2754 and Ac3H11_2755 are separated by 37 nucleotides
Ac3H11_2753 - Cytochrome P450, at 1,053,379 to 1,054,686
_2753
Ac3H11_2754 - Biphenyl dioxygenase beta subunit (EC 1.14.12.18), at 1,054,693 to 1,055,262
_2754
Ac3H11_2755 - Large subunit naph/bph dioxygenase, at 1,055,300 to 1,056,700
_2755
Position (kb)
1054
1055
1056 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1054.013 kb on + strand, within Ac3H11_2753 at 1054.013 kb on + strand, within Ac3H11_2753 at 1054.013 kb on + strand, within Ac3H11_2753 at 1054.014 kb on - strand, within Ac3H11_2753 at 1054.014 kb on - strand, within Ac3H11_2753 at 1054.014 kb on - strand, within Ac3H11_2753 at 1054.119 kb on - strand, within Ac3H11_2753 at 1054.160 kb on + strand, within Ac3H11_2753 at 1054.161 kb on - strand, within Ac3H11_2753 at 1054.181 kb on + strand, within Ac3H11_2753 at 1054.182 kb on - strand, within Ac3H11_2753 at 1054.182 kb on - strand, within Ac3H11_2753 at 1054.258 kb on + strand, within Ac3H11_2753 at 1054.451 kb on + strand, within Ac3H11_2753 at 1054.452 kb on - strand, within Ac3H11_2753 at 1054.452 kb on - strand, within Ac3H11_2753 at 1054.452 kb on - strand, within Ac3H11_2753 at 1054.575 kb on - strand at 1054.598 kb on + strand at 1054.599 kb on - strand at 1054.823 kb on + strand, within Ac3H11_2754 at 1054.859 kb on + strand, within Ac3H11_2754 at 1054.859 kb on + strand, within Ac3H11_2754 at 1054.859 kb on + strand, within Ac3H11_2754 at 1054.859 kb on + strand, within Ac3H11_2754 at 1054.860 kb on - strand, within Ac3H11_2754 at 1054.898 kb on + strand, within Ac3H11_2754 at 1054.899 kb on - strand, within Ac3H11_2754 at 1054.975 kb on - strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.003 kb on + strand, within Ac3H11_2754 at 1055.004 kb on - strand, within Ac3H11_2754 at 1055.004 kb on - strand, within Ac3H11_2754 at 1055.004 kb on - strand, within Ac3H11_2754 at 1055.087 kb on + strand, within Ac3H11_2754 at 1055.088 kb on - strand, within Ac3H11_2754 at 1055.088 kb on - strand, within Ac3H11_2754 at 1055.088 kb on - strand, within Ac3H11_2754 at 1055.088 kb on - strand, within Ac3H11_2754 at 1055.183 kb on + strand, within Ac3H11_2754 at 1055.184 kb on - strand, within Ac3H11_2754 at 1055.184 kb on - strand, within Ac3H11_2754 at 1055.331 kb on + strand at 1055.421 kb on + strand at 1055.433 kb on + strand at 1055.434 kb on - strand at 1055.621 kb on - strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.640 kb on + strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.641 kb on - strand, within Ac3H11_2755 at 1055.691 kb on + strand, within Ac3H11_2755 at 1055.691 kb on + strand, within Ac3H11_2755 at 1055.692 kb on - strand, within Ac3H11_2755 at 1055.692 kb on - strand, within Ac3H11_2755 at 1055.692 kb on - strand, within Ac3H11_2755 at 1055.891 kb on - strand, within Ac3H11_2755 at 1055.891 kb on - strand, within Ac3H11_2755 at 1055.906 kb on - strand, within Ac3H11_2755 at 1055.950 kb on - strand, within Ac3H11_2755 at 1056.162 kb on + strand, within Ac3H11_2755 at 1056.162 kb on + strand, within Ac3H11_2755 at 1056.162 kb on + strand, within Ac3H11_2755 at 1056.163 kb on - strand, within Ac3H11_2755 at 1056.165 kb on + strand, within Ac3H11_2755 at 1056.166 kb on - strand, within Ac3H11_2755 at 1056.166 kb on - strand, within Ac3H11_2755
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 1,054,013 + Ac3H11_2753 0.48 -0.5 1,054,013 + Ac3H11_2753 0.48 -4.0 1,054,013 + Ac3H11_2753 0.48 -1.1 1,054,014 - Ac3H11_2753 0.49 -1.1 1,054,014 - Ac3H11_2753 0.49 -0.9 1,054,014 - Ac3H11_2753 0.49 -0.8 1,054,119 - Ac3H11_2753 0.57 +0.6 1,054,160 + Ac3H11_2753 0.60 +0.1 1,054,161 - Ac3H11_2753 0.60 +0.2 1,054,181 + Ac3H11_2753 0.61 +0.6 1,054,182 - Ac3H11_2753 0.61 +1.1 1,054,182 - Ac3H11_2753 0.61 -1.2 1,054,258 + Ac3H11_2753 0.67 +0.2 1,054,451 + Ac3H11_2753 0.82 -1.7 1,054,452 - Ac3H11_2753 0.82 -2.5 1,054,452 - Ac3H11_2753 0.82 -0.7 1,054,452 - Ac3H11_2753 0.82 -0.1 1,054,575 - +0.5 1,054,598 + -0.0 1,054,599 - -0.1 1,054,823 + Ac3H11_2754 0.23 -2.2 1,054,859 + Ac3H11_2754 0.29 -0.8 1,054,859 + Ac3H11_2754 0.29 -0.1 1,054,859 + Ac3H11_2754 0.29 +0.5 1,054,859 + Ac3H11_2754 0.29 -2.4 1,054,860 - Ac3H11_2754 0.29 -0.7 1,054,898 + Ac3H11_2754 0.36 -0.2 1,054,899 - Ac3H11_2754 0.36 -0.7 1,054,975 - Ac3H11_2754 0.49 -0.9 1,055,003 + Ac3H11_2754 0.54 +1.6 1,055,003 + Ac3H11_2754 0.54 -0.4 1,055,003 + Ac3H11_2754 0.54 +0.5 1,055,003 + Ac3H11_2754 0.54 -0.2 1,055,003 + Ac3H11_2754 0.54 +0.2 1,055,003 + Ac3H11_2754 0.54 -0.4 1,055,003 + Ac3H11_2754 0.54 -1.7 1,055,004 - Ac3H11_2754 0.55 -3.2 1,055,004 - Ac3H11_2754 0.55 -0.1 1,055,004 - Ac3H11_2754 0.55 +0.5 1,055,087 + Ac3H11_2754 0.69 +2.1 1,055,088 - Ac3H11_2754 0.69 -0.4 1,055,088 - Ac3H11_2754 0.69 +0.0 1,055,088 - Ac3H11_2754 0.69 +2.5 1,055,088 - Ac3H11_2754 0.69 -1.2 1,055,183 + Ac3H11_2754 0.86 -0.9 1,055,184 - Ac3H11_2754 0.86 -1.4 1,055,184 - Ac3H11_2754 0.86 +0.1 1,055,331 + +0.2 1,055,421 + -0.8 1,055,433 + -0.3 1,055,434 - -1.2 1,055,621 - Ac3H11_2755 0.23 -0.7 1,055,640 + Ac3H11_2755 0.24 -1.2 1,055,640 + Ac3H11_2755 0.24 +1.2 1,055,640 + Ac3H11_2755 0.24 -0.6 1,055,640 + Ac3H11_2755 0.24 -1.4 1,055,640 + Ac3H11_2755 0.24 +0.9 1,055,640 + Ac3H11_2755 0.24 +0.3 1,055,640 + Ac3H11_2755 0.24 +0.3 1,055,640 + Ac3H11_2755 0.24 -1.4 1,055,640 + Ac3H11_2755 0.24 -0.8 1,055,640 + Ac3H11_2755 0.24 -0.7 1,055,640 + Ac3H11_2755 0.24 +1.1 1,055,640 + Ac3H11_2755 0.24 +0.3 1,055,641 - Ac3H11_2755 0.24 +0.3 1,055,641 - Ac3H11_2755 0.24 -1.2 1,055,641 - Ac3H11_2755 0.24 -0.9 1,055,641 - Ac3H11_2755 0.24 -0.6 1,055,641 - Ac3H11_2755 0.24 +0.8 1,055,641 - Ac3H11_2755 0.24 -1.3 1,055,641 - Ac3H11_2755 0.24 -1.2 1,055,641 - Ac3H11_2755 0.24 -0.3 1,055,641 - Ac3H11_2755 0.24 +0.1 1,055,641 - Ac3H11_2755 0.24 +0.2 1,055,691 + Ac3H11_2755 0.28 -2.0 1,055,691 + Ac3H11_2755 0.28 +0.8 1,055,692 - Ac3H11_2755 0.28 +0.1 1,055,692 - Ac3H11_2755 0.28 +0.2 1,055,692 - Ac3H11_2755 0.28 +0.6 1,055,891 - Ac3H11_2755 0.42 -0.4 1,055,891 - Ac3H11_2755 0.42 -0.4 1,055,906 - Ac3H11_2755 0.43 -1.7 1,055,950 - Ac3H11_2755 0.46 -0.7 1,056,162 + Ac3H11_2755 0.62 +0.7 1,056,162 + Ac3H11_2755 0.62 -0.7 1,056,162 + Ac3H11_2755 0.62 +0.6 1,056,163 - Ac3H11_2755 0.62 -1.3 1,056,165 + Ac3H11_2755 0.62 -1.8 1,056,166 - Ac3H11_2755 0.62 -0.9 1,056,166 - Ac3H11_2755 0.62 -0.0
Or see this region's nucleotide sequence