Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_153 and Ac3H11_154 are separated by 106 nucleotides Ac3H11_154 and Ac3H11_155 are separated by 38 nucleotides
Ac3H11_153 - Similar to 5-oxoprolinase (EC 3.5.2.9) and Methylhydantoinases A, B (EC 3.5.2.14), contradiction in experimental data (see Annotation), at 36,904 to 40,548
_153
Ac3H11_154 - TRAP transporter solute receptor, unknown substrate 5, at 40,655 to 41,620
_154
Ac3H11_155 - TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5, at 41,659 to 42,957
_155
Position (kb)
40
41
42 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 39.894 kb on - strand, within Ac3H11_153 at 39.894 kb on - strand, within Ac3H11_153 at 39.894 kb on - strand, within Ac3H11_153 at 40.173 kb on - strand, within Ac3H11_153 at 40.192 kb on + strand at 40.193 kb on - strand at 40.193 kb on - strand at 40.193 kb on - strand at 40.193 kb on - strand at 40.193 kb on - strand at 40.573 kb on - strand at 40.573 kb on - strand at 40.656 kb on + strand at 40.656 kb on + strand at 40.656 kb on + strand at 40.668 kb on + strand at 40.669 kb on - strand at 40.968 kb on + strand, within Ac3H11_154 at 40.969 kb on - strand, within Ac3H11_154 at 40.969 kb on - strand, within Ac3H11_154 at 41.133 kb on + strand, within Ac3H11_154 at 41.133 kb on + strand, within Ac3H11_154 at 41.134 kb on - strand, within Ac3H11_154 at 41.220 kb on + strand, within Ac3H11_154 at 41.220 kb on + strand, within Ac3H11_154 at 41.221 kb on - strand, within Ac3H11_154 at 41.708 kb on + strand at 41.709 kb on - strand at 42.116 kb on + strand, within Ac3H11_155 at 42.117 kb on - strand, within Ac3H11_155 at 42.245 kb on + strand, within Ac3H11_155 at 42.246 kb on - strand, within Ac3H11_155 at 42.246 kb on - strand, within Ac3H11_155 at 42.246 kb on - strand, within Ac3H11_155 at 42.305 kb on + strand, within Ac3H11_155 at 42.383 kb on + strand, within Ac3H11_155 at 42.384 kb on - strand, within Ac3H11_155
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 39,894 - Ac3H11_153 0.82 -0.1 39,894 - Ac3H11_153 0.82 -1.2 39,894 - Ac3H11_153 0.82 -1.2 40,173 - Ac3H11_153 0.90 +1.0 40,192 + -0.1 40,193 - +2.0 40,193 - +0.1 40,193 - -2.4 40,193 - -1.3 40,193 - -0.1 40,573 - -0.5 40,573 - +0.4 40,656 + -1.1 40,656 + +1.8 40,656 + +4.5 40,668 + -2.4 40,669 - -1.2 40,968 + Ac3H11_154 0.32 -1.7 40,969 - Ac3H11_154 0.33 -0.6 40,969 - Ac3H11_154 0.33 +1.0 41,133 + Ac3H11_154 0.49 -2.9 41,133 + Ac3H11_154 0.49 -0.9 41,134 - Ac3H11_154 0.50 +1.8 41,220 + Ac3H11_154 0.58 +0.9 41,220 + Ac3H11_154 0.58 -0.1 41,221 - Ac3H11_154 0.59 -0.3 41,708 + -1.1 41,709 - +0.3 42,116 + Ac3H11_155 0.35 -0.6 42,117 - Ac3H11_155 0.35 -1.5 42,245 + Ac3H11_155 0.45 -0.5 42,246 - Ac3H11_155 0.45 -0.3 42,246 - Ac3H11_155 0.45 -0.6 42,246 - Ac3H11_155 0.45 +1.7 42,305 + Ac3H11_155 0.50 +0.7 42,383 + Ac3H11_155 0.56 +0.3 42,384 - Ac3H11_155 0.56 +0.1
Or see this region's nucleotide sequence