Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1504

Experiment: Bacitracin 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1503 and Ac3H11_1504 overlap by 4 nucleotidesAc3H11_1504 and Ac3H11_1505 are separated by 106 nucleotides Ac3H11_1503 - Molybdopterin biosynthesis protein MoeA, at 81,583 to 82,830 _1503 Ac3H11_1504 - Molybdopterin-guanine dinucleotide biosynthesis protein MobB, at 82,827 to 83,396 _1504 Ac3H11_1505 - Threonine synthase (EC 4.2.3.1), at 83,503 to 84,948 _1505 Position (kb) 82 83 84Strain fitness (log2 ratio) -2 -1 0 1at 82.132 kb on + strand, within Ac3H11_1503at 82.132 kb on + strand, within Ac3H11_1503at 82.132 kb on + strand, within Ac3H11_1503at 82.132 kb on + strand, within Ac3H11_1503at 82.133 kb on - strand, within Ac3H11_1503at 82.202 kb on + strand, within Ac3H11_1503at 82.203 kb on - strand, within Ac3H11_1503at 82.203 kb on - strand, within Ac3H11_1503at 82.203 kb on - strand, within Ac3H11_1503at 82.203 kb on - strand, within Ac3H11_1503at 82.203 kb on - strand, within Ac3H11_1503at 82.443 kb on + strand, within Ac3H11_1503at 82.443 kb on + strand, within Ac3H11_1503at 82.443 kb on + strand, within Ac3H11_1503at 82.443 kb on + strand, within Ac3H11_1503at 82.443 kb on + strand, within Ac3H11_1503at 82.443 kb on + strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.444 kb on - strand, within Ac3H11_1503at 82.658 kb on + strand, within Ac3H11_1503at 82.658 kb on + strand, within Ac3H11_1503at 82.873 kb on + strandat 82.873 kb on + strandat 82.874 kb on - strandat 82.874 kb on - strandat 82.874 kb on - strandat 83.015 kb on - strand, within Ac3H11_1504at 83.122 kb on + strand, within Ac3H11_1504at 83.122 kb on + strand, within Ac3H11_1504at 83.123 kb on - strand, within Ac3H11_1504at 83.242 kb on + strand, within Ac3H11_1504at 83.242 kb on + strand, within Ac3H11_1504at 83.242 kb on + strand, within Ac3H11_1504at 83.242 kb on + strand, within Ac3H11_1504at 83.242 kb on + strand, within Ac3H11_1504at 83.243 kb on - strand, within Ac3H11_1504at 83.243 kb on - strand, within Ac3H11_1504at 83.431 kb on + strandat 83.486 kb on + strandat 83.486 kb on + strandat 83.486 kb on + strandat 83.487 kb on - strandat 83.487 kb on - strandat 83.487 kb on - strandat 83.487 kb on - strandat 83.487 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml
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82,132 + Ac3H11_1503 0.44 -0.3
82,132 + Ac3H11_1503 0.44 +1.6
82,132 + Ac3H11_1503 0.44 -2.6
82,132 + Ac3H11_1503 0.44 +1.1
82,133 - Ac3H11_1503 0.44 -0.7
82,202 + Ac3H11_1503 0.50 +1.0
82,203 - Ac3H11_1503 0.50 -0.4
82,203 - Ac3H11_1503 0.50 +1.7
82,203 - Ac3H11_1503 0.50 +0.4
82,203 - Ac3H11_1503 0.50 -0.5
82,203 - Ac3H11_1503 0.50 -1.9
82,443 + Ac3H11_1503 0.69 +0.6
82,443 + Ac3H11_1503 0.69 -1.1
82,443 + Ac3H11_1503 0.69 -0.9
82,443 + Ac3H11_1503 0.69 +0.5
82,443 + Ac3H11_1503 0.69 -0.1
82,443 + Ac3H11_1503 0.69 +0.7
82,444 - Ac3H11_1503 0.69 -0.1
82,444 - Ac3H11_1503 0.69 -1.6
82,444 - Ac3H11_1503 0.69 +0.8
82,444 - Ac3H11_1503 0.69 +0.6
82,444 - Ac3H11_1503 0.69 -0.3
82,444 - Ac3H11_1503 0.69 +0.1
82,444 - Ac3H11_1503 0.69 -0.1
82,658 + Ac3H11_1503 0.86 +0.1
82,658 + Ac3H11_1503 0.86 -2.5
82,873 + -0.9
82,873 + -1.8
82,874 - +0.9
82,874 - -0.8
82,874 - -0.7
83,015 - Ac3H11_1504 0.33 -0.6
83,122 + Ac3H11_1504 0.52 -0.1
83,122 + Ac3H11_1504 0.52 +0.3
83,123 - Ac3H11_1504 0.52 -0.6
83,242 + Ac3H11_1504 0.73 -0.8
83,242 + Ac3H11_1504 0.73 -0.2
83,242 + Ac3H11_1504 0.73 -0.2
83,242 + Ac3H11_1504 0.73 +0.2
83,242 + Ac3H11_1504 0.73 -0.9
83,243 - Ac3H11_1504 0.73 -0.3
83,243 - Ac3H11_1504 0.73 +0.1
83,431 + -0.4
83,486 + -2.2
83,486 + -0.6
83,486 + -0.2
83,487 - +0.4
83,487 - -0.7
83,487 - +1.2
83,487 - +0.6
83,487 - +0.1

Or see this region's nucleotide sequence