Experiment: Bacitracin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1029 and Ac3H11_1030 are separated by 86 nucleotides Ac3H11_1030 and Ac3H11_1031 are separated by 261 nucleotides Ac3H11_1031 and Ac3H11_1032 are separated by 36 nucleotides Ac3H11_1032 and Ac3H11_1033 overlap by 4 nucleotides Ac3H11_1033 and Ac3H11_1034 are separated by 92 nucleotides
Ac3H11_1029 - Putative cytoplasmic protein, at 150,352 to 150,579
_1029
Ac3H11_1030 - hypothetical protein, at 150,666 to 150,872
_1030
Ac3H11_1031 - hypothetical protein, at 151,134 to 151,307
_1031
Ac3H11_1032 - Truncated hemoglobins, at 151,344 to 151,793
_1032
Ac3H11_1033 - Nitric oxide-dependent regulator DnrN or NorA, at 151,790 to 152,560
_1033
Ac3H11_1034 - Nitrite-sensitive transcriptional repressor NsrR, at 152,653 to 153,192
_1034
Position (kb) 151
152 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 150.442 kb on + strand, within Ac3H11_1029 at 150.443 kb on - strand, within Ac3H11_1029 at 150.443 kb on - strand, within Ac3H11_1029 at 150.706 kb on + strand, within Ac3H11_1030 at 150.706 kb on + strand, within Ac3H11_1030 at 150.706 kb on + strand, within Ac3H11_1030 at 150.706 kb on + strand, within Ac3H11_1030 at 150.707 kb on - strand, within Ac3H11_1030 at 150.707 kb on - strand, within Ac3H11_1030 at 150.707 kb on - strand, within Ac3H11_1030 at 150.707 kb on - strand, within Ac3H11_1030 at 150.707 kb on - strand, within Ac3H11_1030 at 150.798 kb on + strand, within Ac3H11_1030 at 150.798 kb on + strand, within Ac3H11_1030 at 150.798 kb on + strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.799 kb on - strand, within Ac3H11_1030 at 150.832 kb on + strand, within Ac3H11_1030 at 150.832 kb on + strand, within Ac3H11_1030 at 150.832 kb on + strand, within Ac3H11_1030 at 150.832 kb on + strand, within Ac3H11_1030 at 150.833 kb on - strand, within Ac3H11_1030 at 150.902 kb on + strand at 150.902 kb on + strand at 150.902 kb on + strand at 150.902 kb on + strand at 150.903 kb on - strand at 150.916 kb on + strand at 150.916 kb on + strand at 150.916 kb on + strand at 150.917 kb on - strand at 150.917 kb on - strand at 150.993 kb on + strand at 150.993 kb on + strand at 151.093 kb on + strand at 151.093 kb on + strand at 151.093 kb on + strand at 151.093 kb on + strand at 151.094 kb on - strand at 151.106 kb on + strand at 151.107 kb on - strand at 151.107 kb on - strand at 151.107 kb on - strand at 151.129 kb on + strand at 151.129 kb on + strand at 151.129 kb on + strand at 151.129 kb on + strand at 151.130 kb on - strand at 151.130 kb on - strand at 151.130 kb on - strand at 151.130 kb on - strand at 151.146 kb on - strand at 151.305 kb on + strand at 151.305 kb on + strand at 151.305 kb on + strand at 151.306 kb on - strand at 151.310 kb on + strand at 151.311 kb on - strand at 151.409 kb on - strand, within Ac3H11_1032 at 151.705 kb on + strand, within Ac3H11_1032 at 151.706 kb on - strand, within Ac3H11_1032 at 151.706 kb on - strand, within Ac3H11_1032 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.947 kb on + strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand, within Ac3H11_1033 at 151.948 kb on - strand at 151.948 kb on - strand, within Ac3H11_1033 at 152.284 kb on + strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.622 kb on + strand at 152.622 kb on + strand at 152.622 kb on + strand at 152.623 kb on - strand at 152.623 kb on - strand at 152.677 kb on + strand at 152.678 kb on - strand at 152.678 kb on - strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.699 kb on - strand at 152.699 kb on - strand at 152.699 kb on - strand at 152.699 kb on - strand at 152.759 kb on - strand, within Ac3H11_1034
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.008 mg/ml remove 150,442 + Ac3H11_1029 0.39 -1.7 150,443 - Ac3H11_1029 0.40 -0.3 150,443 - Ac3H11_1029 0.40 +0.3 150,706 + Ac3H11_1030 0.19 -0.7 150,706 + Ac3H11_1030 0.19 -1.8 150,706 + Ac3H11_1030 0.19 -0.2 150,706 + Ac3H11_1030 0.19 -0.1 150,707 - Ac3H11_1030 0.20 +2.0 150,707 - Ac3H11_1030 0.20 +1.7 150,707 - Ac3H11_1030 0.20 +0.3 150,707 - Ac3H11_1030 0.20 +0.3 150,707 - Ac3H11_1030 0.20 -0.1 150,798 + Ac3H11_1030 0.64 +0.3 150,798 + Ac3H11_1030 0.64 +1.4 150,798 + Ac3H11_1030 0.64 -0.8 150,799 - Ac3H11_1030 0.64 -0.1 150,799 - Ac3H11_1030 0.64 -0.9 150,799 - Ac3H11_1030 0.64 -1.7 150,799 - Ac3H11_1030 0.64 +1.8 150,799 - Ac3H11_1030 0.64 -0.3 150,799 - Ac3H11_1030 0.64 +0.2 150,799 - Ac3H11_1030 0.64 +1.1 150,799 - Ac3H11_1030 0.64 -2.1 150,799 - Ac3H11_1030 0.64 -1.2 150,799 - Ac3H11_1030 0.64 +0.6 150,832 + Ac3H11_1030 0.80 -2.3 150,832 + Ac3H11_1030 0.80 +1.8 150,832 + Ac3H11_1030 0.80 -2.2 150,832 + Ac3H11_1030 0.80 -0.4 150,833 - Ac3H11_1030 0.81 +1.4 150,902 + +0.4 150,902 + +0.8 150,902 + +1.3 150,902 + +0.2 150,903 - +0.1 150,916 + -1.6 150,916 + -0.3 150,916 + -0.5 150,917 - -0.5 150,917 - +1.4 150,993 + -0.3 150,993 + -1.0 151,093 + -0.0 151,093 + -0.6 151,093 + -1.8 151,093 + +0.2 151,094 - -0.1 151,106 + +1.5 151,107 - +2.1 151,107 - -0.5 151,107 - -1.0 151,129 + -1.0 151,129 + +0.5 151,129 + -1.3 151,129 + -1.2 151,130 - +0.9 151,130 - +1.4 151,130 - +0.8 151,130 - +1.1 151,146 - +0.9 151,305 + -0.0 151,305 + +0.9 151,305 + +0.7 151,306 - -3.2 151,310 + +0.0 151,311 - -0.0 151,409 - Ac3H11_1032 0.14 +1.1 151,705 + Ac3H11_1032 0.80 +0.6 151,706 - Ac3H11_1032 0.80 +0.9 151,706 - Ac3H11_1032 0.80 +0.8 151,947 + Ac3H11_1033 0.20 +0.7 151,947 + Ac3H11_1033 0.20 +1.4 151,947 + Ac3H11_1033 0.20 +0.6 151,947 + Ac3H11_1033 0.20 +0.9 151,947 + Ac3H11_1033 0.20 -0.3 151,947 + Ac3H11_1033 0.20 -1.9 151,947 + Ac3H11_1033 0.20 +0.5 151,947 + Ac3H11_1033 0.20 +0.7 151,947 + Ac3H11_1033 0.20 +0.8 151,948 - Ac3H11_1033 0.20 -0.4 151,948 - Ac3H11_1033 0.20 -0.7 151,948 - Ac3H11_1033 0.20 -0.9 151,948 - Ac3H11_1033 0.20 +0.1 151,948 - Ac3H11_1033 0.20 +0.2 151,948 - Ac3H11_1033 0.20 -2.1 151,948 - Ac3H11_1033 0.20 -0.2 151,948 - Ac3H11_1033 0.20 -0.9 151,948 - Ac3H11_1033 0.20 -0.4 151,948 - +0.7 151,948 - Ac3H11_1033 0.20 +0.5 152,284 + Ac3H11_1033 0.64 -0.5 152,285 - Ac3H11_1033 0.64 -0.0 152,285 - Ac3H11_1033 0.64 +0.9 152,285 - Ac3H11_1033 0.64 -0.2 152,285 - Ac3H11_1033 0.64 +0.6 152,285 - Ac3H11_1033 0.64 +0.4 152,622 + -1.3 152,622 + +1.1 152,622 + -0.8 152,623 - +0.9 152,623 - -0.8 152,677 + +0.8 152,678 - -0.3 152,678 - -1.4 152,698 + +0.2 152,698 + -1.4 152,698 + -1.7 152,698 + -1.9 152,698 + -3.6 152,698 + +0.9 152,698 + +0.4 152,699 - -1.9 152,699 - -0.7 152,699 - -2.8 152,699 - -1.4 152,759 - Ac3H11_1034 0.20 -1.8
Or see this region's nucleotide sequence