Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14885 and AO353_14890 overlap by 8 nucleotides AO353_14890 and AO353_14895 are separated by 9 nucleotides AO353_14895 and AO353_14900 are separated by 222 nucleotides
AO353_14885: AO353_14885 - glutamine ABC transporter ATP-binding protein, at 3,294,012 to 3,294,734
_14885
AO353_14890: AO353_14890 - amino acid ABC transporter, at 3,294,727 to 3,295,377
_14890
AO353_14895: AO353_14895 - ABC transporter permease, at 3,295,387 to 3,296,052
_14895
AO353_14900: AO353_14900 - amino acid ABC transporter substrate-binding protein, at 3,296,275 to 3,297,093
_14900
Position (kb)
3295
3296
3297 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3294.710 kb on + strand at 3294.711 kb on - strand at 3294.711 kb on - strand at 3294.711 kb on - strand at 3294.794 kb on + strand, within AO353_14890 at 3294.794 kb on + strand, within AO353_14890 at 3294.794 kb on + strand, within AO353_14890 at 3294.794 kb on + strand, within AO353_14890 at 3294.794 kb on + strand, within AO353_14890 at 3294.795 kb on - strand, within AO353_14890 at 3294.795 kb on - strand, within AO353_14890 at 3294.795 kb on - strand, within AO353_14890 at 3294.795 kb on - strand, within AO353_14890 at 3294.795 kb on - strand, within AO353_14890 at 3294.795 kb on - strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.797 kb on + strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.798 kb on - strand, within AO353_14890 at 3294.801 kb on + strand, within AO353_14890 at 3294.801 kb on + strand, within AO353_14890 at 3294.801 kb on + strand, within AO353_14890 at 3294.801 kb on + strand, within AO353_14890 at 3294.801 kb on + strand, within AO353_14890 at 3294.801 kb on + strand, within AO353_14890 at 3294.802 kb on - strand, within AO353_14890 at 3294.802 kb on - strand, within AO353_14890 at 3294.802 kb on - strand, within AO353_14890 at 3294.802 kb on - strand, within AO353_14890 at 3294.820 kb on + strand, within AO353_14890 at 3295.080 kb on - strand, within AO353_14890 at 3295.080 kb on - strand, within AO353_14890 at 3295.080 kb on - strand, within AO353_14890 at 3295.080 kb on - strand, within AO353_14890 at 3295.340 kb on + strand at 3295.340 kb on + strand at 3295.340 kb on + strand at 3295.340 kb on + strand at 3295.341 kb on - strand at 3295.341 kb on - strand at 3295.341 kb on - strand at 3295.341 kb on - strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.373 kb on + strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.374 kb on - strand at 3295.388 kb on + strand at 3295.388 kb on + strand at 3295.388 kb on + strand at 3295.388 kb on + strand at 3295.389 kb on - strand at 3295.389 kb on - strand at 3295.389 kb on - strand at 3295.389 kb on - strand at 3295.389 kb on - strand at 3295.389 kb on - strand at 3295.389 kb on - strand at 3295.391 kb on + strand at 3295.455 kb on - strand, within AO353_14895 at 3295.455 kb on - strand, within AO353_14895 at 3295.455 kb on - strand, within AO353_14895 at 3295.455 kb on - strand, within AO353_14895 at 3295.455 kb on - strand, within AO353_14895 at 3295.455 kb on - strand, within AO353_14895 at 3295.605 kb on - strand, within AO353_14895 at 3295.740 kb on - strand, within AO353_14895 at 3295.740 kb on - strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.820 kb on + strand, within AO353_14895 at 3295.821 kb on - strand, within AO353_14895 at 3295.821 kb on - strand, within AO353_14895 at 3295.821 kb on - strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.829 kb on + strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.830 kb on - strand, within AO353_14895 at 3295.854 kb on + strand, within AO353_14895 at 3295.854 kb on + strand, within AO353_14895 at 3295.854 kb on + strand, within AO353_14895 at 3295.855 kb on - strand, within AO353_14895 at 3296.043 kb on - strand at 3296.043 kb on - strand at 3296.043 kb on - strand at 3296.043 kb on - strand at 3296.095 kb on + strand at 3296.095 kb on + strand at 3296.104 kb on + strand at 3296.104 kb on + strand at 3296.104 kb on + strand at 3296.104 kb on + strand at 3296.104 kb on + strand at 3296.104 kb on + strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.105 kb on - strand at 3296.108 kb on + strand at 3296.108 kb on + strand at 3296.108 kb on + strand at 3296.108 kb on + strand at 3296.109 kb on - strand at 3296.109 kb on - strand at 3296.109 kb on - strand at 3296.109 kb on - strand at 3296.109 kb on - strand at 3296.109 kb on - strand at 3296.115 kb on + strand at 3296.115 kb on + strand at 3296.116 kb on - strand at 3296.116 kb on - strand at 3296.116 kb on - strand at 3296.387 kb on + strand, within AO353_14900 at 3296.387 kb on + strand, within AO353_14900 at 3296.387 kb on + strand, within AO353_14900 at 3296.387 kb on + strand, within AO353_14900 at 3296.387 kb on + strand, within AO353_14900 at 3296.388 kb on - strand, within AO353_14900 at 3296.388 kb on - strand, within AO353_14900 at 3296.432 kb on + strand, within AO353_14900 at 3296.432 kb on + strand, within AO353_14900 at 3296.433 kb on - strand, within AO353_14900 at 3296.433 kb on - strand, within AO353_14900 at 3296.433 kb on - strand, within AO353_14900 at 3296.433 kb on - strand, within AO353_14900 at 3296.433 kb on - strand, within AO353_14900 at 3296.444 kb on + strand, within AO353_14900 at 3296.444 kb on + strand, within AO353_14900 at 3296.444 kb on + strand, within AO353_14900 at 3296.445 kb on - strand, within AO353_14900 at 3296.477 kb on + strand, within AO353_14900 at 3296.477 kb on + strand, within AO353_14900 at 3296.478 kb on - strand, within AO353_14900 at 3296.478 kb on - strand, within AO353_14900 at 3296.478 kb on - strand, within AO353_14900 at 3296.579 kb on + strand, within AO353_14900 at 3296.580 kb on - strand, within AO353_14900 at 3296.690 kb on + strand, within AO353_14900 at 3296.690 kb on + strand, within AO353_14900 at 3296.691 kb on - strand, within AO353_14900 at 3296.744 kb on + strand, within AO353_14900 at 3296.744 kb on + strand, within AO353_14900 at 3296.744 kb on + strand, within AO353_14900 at 3296.744 kb on + strand, within AO353_14900 at 3296.744 kb on + strand, within AO353_14900 at 3296.744 kb on + strand, within AO353_14900 at 3296.906 kb on + strand, within AO353_14900 at 3296.906 kb on + strand, within AO353_14900 at 3296.907 kb on - strand, within AO353_14900 at 3296.907 kb on - strand, within AO353_14900 at 3296.931 kb on + strand, within AO353_14900
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 3,294,710 + -0.2 3,294,711 - -0.3 3,294,711 - +0.3 3,294,711 - -0.2 3,294,794 + AO353_14890 0.10 -0.3 3,294,794 + AO353_14890 0.10 +0.3 3,294,794 + AO353_14890 0.10 -0.1 3,294,794 + AO353_14890 0.10 -0.3 3,294,794 + AO353_14890 0.10 -0.4 3,294,795 - AO353_14890 0.10 -0.7 3,294,795 - AO353_14890 0.10 +0.5 3,294,795 - AO353_14890 0.10 -0.5 3,294,795 - AO353_14890 0.10 +0.5 3,294,795 - AO353_14890 0.10 -1.7 3,294,795 - AO353_14890 0.10 -0.7 3,294,797 + AO353_14890 0.11 -0.5 3,294,797 + AO353_14890 0.11 +0.1 3,294,797 + AO353_14890 0.11 +1.2 3,294,797 + AO353_14890 0.11 -0.4 3,294,797 + AO353_14890 0.11 +1.2 3,294,797 + AO353_14890 0.11 +0.5 3,294,797 + AO353_14890 0.11 -1.1 3,294,797 + AO353_14890 0.11 -0.8 3,294,798 - AO353_14890 0.11 +0.7 3,294,798 - AO353_14890 0.11 -1.3 3,294,798 - AO353_14890 0.11 +0.5 3,294,798 - AO353_14890 0.11 +0.4 3,294,798 - AO353_14890 0.11 -1.5 3,294,798 - AO353_14890 0.11 -1.1 3,294,798 - AO353_14890 0.11 +0.5 3,294,798 - AO353_14890 0.11 -1.0 3,294,798 - AO353_14890 0.11 +0.5 3,294,801 + AO353_14890 0.11 -0.3 3,294,801 + AO353_14890 0.11 +0.3 3,294,801 + AO353_14890 0.11 +0.2 3,294,801 + AO353_14890 0.11 -1.5 3,294,801 + AO353_14890 0.11 -1.9 3,294,801 + AO353_14890 0.11 +2.0 3,294,802 - AO353_14890 0.12 +0.1 3,294,802 - AO353_14890 0.12 -0.9 3,294,802 - AO353_14890 0.12 -0.6 3,294,802 - AO353_14890 0.12 +0.6 3,294,820 + AO353_14890 0.14 -0.1 3,295,080 - AO353_14890 0.54 -0.2 3,295,080 - AO353_14890 0.54 -0.1 3,295,080 - AO353_14890 0.54 +0.3 3,295,080 - AO353_14890 0.54 -0.1 3,295,340 + +0.9 3,295,340 + -0.0 3,295,340 + +0.2 3,295,340 + +2.8 3,295,341 - -0.3 3,295,341 - -0.3 3,295,341 - -2.0 3,295,341 - +0.8 3,295,373 + +0.2 3,295,373 + +0.3 3,295,373 + -0.0 3,295,373 + -0.6 3,295,373 + -0.5 3,295,373 + +0.2 3,295,373 + +0.5 3,295,373 + -0.4 3,295,373 + +0.2 3,295,373 + -0.8 3,295,373 + -1.1 3,295,373 + +0.1 3,295,373 + -0.5 3,295,373 + +0.5 3,295,373 + -0.5 3,295,374 - -0.7 3,295,374 - +0.5 3,295,374 - -0.7 3,295,374 - +1.8 3,295,374 - -0.8 3,295,374 - +0.6 3,295,374 - +0.7 3,295,374 - -0.0 3,295,374 - -0.4 3,295,374 - +0.2 3,295,374 - +0.6 3,295,374 - +1.0 3,295,374 - +0.2 3,295,374 - -1.1 3,295,374 - +0.1 3,295,374 - -0.5 3,295,374 - -0.1 3,295,374 - +2.0 3,295,374 - +0.3 3,295,388 + -0.7 3,295,388 + +0.0 3,295,388 + +2.7 3,295,388 + +1.2 3,295,389 - +0.7 3,295,389 - -0.3 3,295,389 - +0.3 3,295,389 - +0.6 3,295,389 - +0.4 3,295,389 - +0.8 3,295,389 - +1.0 3,295,391 + +0.7 3,295,455 - AO353_14895 0.10 -0.2 3,295,455 - AO353_14895 0.10 +0.2 3,295,455 - AO353_14895 0.10 -1.3 3,295,455 - AO353_14895 0.10 -0.1 3,295,455 - AO353_14895 0.10 -2.1 3,295,455 - AO353_14895 0.10 +0.0 3,295,605 - AO353_14895 0.33 -0.5 3,295,740 - AO353_14895 0.53 -1.7 3,295,740 - AO353_14895 0.53 +0.9 3,295,820 + AO353_14895 0.65 -0.1 3,295,820 + AO353_14895 0.65 -0.5 3,295,820 + AO353_14895 0.65 -0.2 3,295,820 + AO353_14895 0.65 +0.1 3,295,820 + AO353_14895 0.65 +0.9 3,295,820 + AO353_14895 0.65 +0.5 3,295,820 + AO353_14895 0.65 +1.0 3,295,821 - AO353_14895 0.65 +0.8 3,295,821 - AO353_14895 0.65 -0.4 3,295,821 - AO353_14895 0.65 -2.5 3,295,829 + AO353_14895 0.66 -1.5 3,295,829 + AO353_14895 0.66 -0.4 3,295,829 + AO353_14895 0.66 +0.2 3,295,829 + AO353_14895 0.66 -0.9 3,295,829 + AO353_14895 0.66 +0.0 3,295,829 + AO353_14895 0.66 -0.3 3,295,829 + AO353_14895 0.66 +0.1 3,295,829 + AO353_14895 0.66 -0.5 3,295,829 + AO353_14895 0.66 +0.3 3,295,829 + AO353_14895 0.66 -0.1 3,295,829 + AO353_14895 0.66 -0.4 3,295,829 + AO353_14895 0.66 -1.7 3,295,829 + AO353_14895 0.66 +0.3 3,295,829 + AO353_14895 0.66 -0.3 3,295,829 + AO353_14895 0.66 +0.3 3,295,829 + AO353_14895 0.66 -0.1 3,295,829 + AO353_14895 0.66 -0.2 3,295,829 + AO353_14895 0.66 -0.6 3,295,830 - AO353_14895 0.67 -1.3 3,295,830 - AO353_14895 0.67 +0.3 3,295,830 - AO353_14895 0.67 -0.4 3,295,830 - AO353_14895 0.67 -1.5 3,295,830 - AO353_14895 0.67 -1.0 3,295,830 - AO353_14895 0.67 -0.9 3,295,830 - AO353_14895 0.67 -0.2 3,295,830 - AO353_14895 0.67 -2.4 3,295,830 - AO353_14895 0.67 +0.5 3,295,854 + AO353_14895 0.70 +0.3 3,295,854 + AO353_14895 0.70 +0.9 3,295,854 + AO353_14895 0.70 -0.8 3,295,855 - AO353_14895 0.70 -1.3 3,296,043 - -2.1 3,296,043 - +0.9 3,296,043 - -0.7 3,296,043 - -0.5 3,296,095 + +0.7 3,296,095 + -0.3 3,296,104 + -0.7 3,296,104 + +0.7 3,296,104 + +1.5 3,296,104 + +0.9 3,296,104 + +0.5 3,296,104 + -0.3 3,296,105 - -2.3 3,296,105 - -3.1 3,296,105 - +0.6 3,296,105 - -0.8 3,296,105 - +1.0 3,296,105 - -1.6 3,296,105 - -0.9 3,296,105 - -1.9 3,296,105 - +1.9 3,296,105 - +0.1 3,296,108 + -0.7 3,296,108 + -1.1 3,296,108 + +0.9 3,296,108 + +0.0 3,296,109 - +1.5 3,296,109 - -0.9 3,296,109 - -0.9 3,296,109 - -0.5 3,296,109 - +1.5 3,296,109 - +0.9 3,296,115 + +0.5 3,296,115 + -0.1 3,296,116 - +0.5 3,296,116 - -0.8 3,296,116 - +0.3 3,296,387 + AO353_14900 0.14 +0.5 3,296,387 + AO353_14900 0.14 +0.1 3,296,387 + AO353_14900 0.14 -0.8 3,296,387 + AO353_14900 0.14 -1.7 3,296,387 + AO353_14900 0.14 -0.2 3,296,388 - AO353_14900 0.14 +1.5 3,296,388 - AO353_14900 0.14 -0.5 3,296,432 + AO353_14900 0.19 +0.6 3,296,432 + AO353_14900 0.19 -0.3 3,296,433 - AO353_14900 0.19 +0.1 3,296,433 - AO353_14900 0.19 -0.1 3,296,433 - AO353_14900 0.19 -1.1 3,296,433 - AO353_14900 0.19 -0.8 3,296,433 - AO353_14900 0.19 -1.2 3,296,444 + AO353_14900 0.21 +1.0 3,296,444 + AO353_14900 0.21 +0.0 3,296,444 + AO353_14900 0.21 +1.0 3,296,445 - AO353_14900 0.21 -0.2 3,296,477 + AO353_14900 0.25 +0.0 3,296,477 + AO353_14900 0.25 -0.8 3,296,478 - AO353_14900 0.25 +0.1 3,296,478 - AO353_14900 0.25 +0.3 3,296,478 - AO353_14900 0.25 -0.8 3,296,579 + AO353_14900 0.37 +0.5 3,296,580 - AO353_14900 0.37 -0.9 3,296,690 + AO353_14900 0.51 -2.4 3,296,690 + AO353_14900 0.51 -0.9 3,296,691 - AO353_14900 0.51 -0.5 3,296,744 + AO353_14900 0.57 +0.6 3,296,744 + AO353_14900 0.57 -0.1 3,296,744 + AO353_14900 0.57 -0.7 3,296,744 + AO353_14900 0.57 +0.9 3,296,744 + AO353_14900 0.57 -0.4 3,296,744 + AO353_14900 0.57 +0.8 3,296,906 + AO353_14900 0.77 -0.3 3,296,906 + AO353_14900 0.77 +0.1 3,296,907 - AO353_14900 0.77 -0.1 3,296,907 - AO353_14900 0.77 -0.4 3,296,931 + AO353_14900 0.80 -0.7
Or see this region's nucleotide sequence