Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07155

Experiment: L-Asparagine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_07145 and AO353_07150 are separated by 67 nucleotidesAO353_07150 and AO353_07155 are separated by 167 nucleotidesAO353_07155 and AO353_07160 are separated by 135 nucleotidesAO353_07160 and AO353_07165 are separated by 34 nucleotides AO353_07145: AO353_07145 - anhydro-N-acetylmuramic acid kinase, at 1,570,694 to 1,571,785 _07145 AO353_07150: AO353_07150 - iron-sulfur cluster insertion protein ErpA, at 1,571,853 to 1,572,203 _07150 AO353_07155: AO353_07155 - N-acetyl-gamma-glutamyl-phosphate reductase, at 1,572,371 to 1,573,405 _07155 AO353_07160: AO353_07160 - hypothetical protein, at 1,573,541 to 1,573,972 _07160 AO353_07165: AO353_07165 - 2-nitropropane dioxygenase, at 1,574,007 to 1,574,975 _07165 Position (kb) 1572 1573 1574Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1571.412 kb on + strand, within AO353_07145at 1571.412 kb on + strand, within AO353_07145at 1571.412 kb on + strand, within AO353_07145at 1571.412 kb on + strand, within AO353_07145at 1571.412 kb on + strand, within AO353_07145at 1571.413 kb on - strand, within AO353_07145at 1571.413 kb on - strand, within AO353_07145at 1571.413 kb on - strand, within AO353_07145at 1571.413 kb on - strand, within AO353_07145at 1571.413 kb on - strand, within AO353_07145at 1571.413 kb on - strand, within AO353_07145at 1571.523 kb on + strand, within AO353_07145at 1571.523 kb on + strand, within AO353_07145at 1571.524 kb on - strand, within AO353_07145at 1571.524 kb on - strand, within AO353_07145at 1571.645 kb on + strand, within AO353_07145at 1571.645 kb on + strand, within AO353_07145at 1571.646 kb on - strand, within AO353_07145at 1571.652 kb on + strand, within AO353_07145at 1571.652 kb on + strand, within AO353_07145at 1571.653 kb on - strand, within AO353_07145at 1571.713 kb on + strandat 1571.713 kb on + strandat 1571.714 kb on - strandat 1571.754 kb on + strandat 1571.755 kb on - strandat 1571.774 kb on + strandat 1571.774 kb on + strandat 1571.774 kb on + strandat 1571.775 kb on - strandat 1571.775 kb on - strandat 1572.224 kb on - strandat 1572.293 kb on + strandat 1572.293 kb on + strandat 1572.293 kb on + strandat 1572.293 kb on + strandat 1572.293 kb on + strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.294 kb on - strandat 1572.295 kb on + strandat 1572.295 kb on + strandat 1572.295 kb on + strandat 1572.295 kb on + strandat 1572.295 kb on + strandat 1572.295 kb on + strandat 1572.295 kb on + strandat 1572.296 kb on - strandat 1572.296 kb on - strandat 1572.296 kb on - strandat 1572.324 kb on + strandat 1572.324 kb on + strandat 1572.372 kb on + strandat 1572.372 kb on + strandat 1572.373 kb on - strandat 1572.373 kb on - strandat 1572.373 kb on - strandat 1572.529 kb on + strand, within AO353_07155at 1572.530 kb on - strand, within AO353_07155at 1572.641 kb on + strand, within AO353_07155at 1572.641 kb on + strand, within AO353_07155at 1572.641 kb on + strand, within AO353_07155at 1572.641 kb on + strand, within AO353_07155at 1572.642 kb on - strand, within AO353_07155at 1572.642 kb on - strand, within AO353_07155at 1572.642 kb on - strand, within AO353_07155at 1572.642 kb on - strand, within AO353_07155at 1572.642 kb on - strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.666 kb on + strand, within AO353_07155at 1572.667 kb on - strand, within AO353_07155at 1572.667 kb on - strand, within AO353_07155at 1572.667 kb on - strand, within AO353_07155at 1572.667 kb on - strand, within AO353_07155at 1572.667 kb on - strand, within AO353_07155at 1572.682 kb on + strand, within AO353_07155at 1572.796 kb on - strand, within AO353_07155at 1572.826 kb on - strand, within AO353_07155at 1572.887 kb on + strand, within AO353_07155at 1572.887 kb on + strand, within AO353_07155at 1572.888 kb on - strand, within AO353_07155at 1572.898 kb on + strand, within AO353_07155at 1572.899 kb on - strand, within AO353_07155at 1573.021 kb on - strand, within AO353_07155at 1573.065 kb on + strand, within AO353_07155at 1573.066 kb on - strand, within AO353_07155at 1573.143 kb on - strand, within AO353_07155at 1573.166 kb on + strand, within AO353_07155at 1573.166 kb on + strand, within AO353_07155at 1573.249 kb on - strand, within AO353_07155at 1573.269 kb on + strand, within AO353_07155at 1573.269 kb on + strand, within AO353_07155at 1573.316 kb on + strandat 1573.316 kb on + strandat 1573.316 kb on + strandat 1573.405 kb on + strandat 1573.406 kb on - strandat 1573.443 kb on + strandat 1573.446 kb on + strandat 1573.446 kb on + strandat 1573.447 kb on - strandat 1573.447 kb on - strandat 1573.485 kb on + strandat 1573.485 kb on + strandat 1573.485 kb on + strandat 1573.485 kb on + strandat 1573.485 kb on + strandat 1573.485 kb on + strandat 1573.503 kb on + strandat 1573.503 kb on + strandat 1573.504 kb on - strandat 1573.504 kb on - strandat 1573.506 kb on + strandat 1573.506 kb on + strandat 1573.506 kb on + strandat 1573.506 kb on + strandat 1573.506 kb on + strandat 1573.506 kb on + strandat 1573.532 kb on + strandat 1573.532 kb on + strandat 1573.532 kb on + strandat 1573.532 kb on + strandat 1573.536 kb on + strandat 1573.536 kb on + strandat 1573.536 kb on + strandat 1573.970 kb on + strandat 1573.970 kb on + strandat 1573.970 kb on + strandat 1573.970 kb on + strandat 1573.970 kb on + strandat 1573.970 kb on + strandat 1573.970 kb on + strandat 1573.971 kb on - strandat 1573.971 kb on - strandat 1573.971 kb on - strandat 1573.976 kb on + strandat 1573.976 kb on + strandat 1573.976 kb on + strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.977 kb on - strandat 1573.980 kb on + strandat 1573.981 kb on - strandat 1573.999 kb on + strandat 1573.999 kb on + strandat 1573.999 kb on + strandat 1574.000 kb on - strandat 1574.201 kb on - strand, within AO353_07165

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Asparagine (C)
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1,571,412 + AO353_07145 0.66 -0.5
1,571,412 + AO353_07145 0.66 -0.0
1,571,412 + AO353_07145 0.66 +0.2
1,571,412 + AO353_07145 0.66 -0.6
1,571,412 + AO353_07145 0.66 +0.6
1,571,413 - AO353_07145 0.66 +0.9
1,571,413 - AO353_07145 0.66 +0.4
1,571,413 - AO353_07145 0.66 -0.1
1,571,413 - AO353_07145 0.66 +0.0
1,571,413 - AO353_07145 0.66 -0.5
1,571,413 - AO353_07145 0.66 -0.1
1,571,523 + AO353_07145 0.76 +0.4
1,571,523 + AO353_07145 0.76 -0.2
1,571,524 - AO353_07145 0.76 -1.8
1,571,524 - AO353_07145 0.76 +1.3
1,571,645 + AO353_07145 0.87 +1.0
1,571,645 + AO353_07145 0.87 +1.8
1,571,646 - AO353_07145 0.87 +0.1
1,571,652 + AO353_07145 0.88 -1.0
1,571,652 + AO353_07145 0.88 +2.9
1,571,653 - AO353_07145 0.88 -0.6
1,571,713 + -1.3
1,571,713 + +0.6
1,571,714 - +1.0
1,571,754 + +0.0
1,571,755 - +1.0
1,571,774 + -0.0
1,571,774 + +0.5
1,571,774 + -0.9
1,571,775 - -0.3
1,571,775 - +0.3
1,572,224 - -0.5
1,572,293 + -0.2
1,572,293 + -2.6
1,572,293 + -0.9
1,572,293 + -0.8
1,572,293 + -0.3
1,572,294 - -0.0
1,572,294 - +0.2
1,572,294 - -0.2
1,572,294 - +0.1
1,572,294 - -0.2
1,572,294 - +1.0
1,572,294 - -0.2
1,572,294 - +0.8
1,572,295 + +0.7
1,572,295 + -0.8
1,572,295 + -1.1
1,572,295 + -0.2
1,572,295 + -0.1
1,572,295 + +0.4
1,572,295 + +0.1
1,572,296 - -0.2
1,572,296 - +0.1
1,572,296 - -1.4
1,572,324 + -1.0
1,572,324 + -0.5
1,572,372 + -0.3
1,572,372 + +1.2
1,572,373 - -1.0
1,572,373 - -0.5
1,572,373 - +1.8
1,572,529 + AO353_07155 0.15 -2.3
1,572,530 - AO353_07155 0.15 -1.0
1,572,641 + AO353_07155 0.26 -1.0
1,572,641 + AO353_07155 0.26 -0.8
1,572,641 + AO353_07155 0.26 -1.5
1,572,641 + AO353_07155 0.26 -1.0
1,572,642 - AO353_07155 0.26 -2.5
1,572,642 - AO353_07155 0.26 -1.9
1,572,642 - AO353_07155 0.26 -1.3
1,572,642 - AO353_07155 0.26 -0.5
1,572,642 - AO353_07155 0.26 -2.5
1,572,666 + AO353_07155 0.29 -2.7
1,572,666 + AO353_07155 0.29 -1.0
1,572,666 + AO353_07155 0.29 -2.3
1,572,666 + AO353_07155 0.29 -0.3
1,572,666 + AO353_07155 0.29 +1.0
1,572,666 + AO353_07155 0.29 -1.9
1,572,666 + AO353_07155 0.29 -2.9
1,572,667 - AO353_07155 0.29 -1.5
1,572,667 - AO353_07155 0.29 -0.9
1,572,667 - AO353_07155 0.29 -2.2
1,572,667 - AO353_07155 0.29 +1.1
1,572,667 - AO353_07155 0.29 -1.0
1,572,682 + AO353_07155 0.30 -2.1
1,572,796 - AO353_07155 0.41 -1.7
1,572,826 - AO353_07155 0.44 -2.5
1,572,887 + AO353_07155 0.50 -2.8
1,572,887 + AO353_07155 0.50 -0.0
1,572,888 - AO353_07155 0.50 -1.6
1,572,898 + AO353_07155 0.51 -3.6
1,572,899 - AO353_07155 0.51 -0.5
1,573,021 - AO353_07155 0.63 -1.5
1,573,065 + AO353_07155 0.67 -1.6
1,573,066 - AO353_07155 0.67 -1.4
1,573,143 - AO353_07155 0.75 -1.9
1,573,166 + AO353_07155 0.77 -2.2
1,573,166 + AO353_07155 0.77 -0.5
1,573,249 - AO353_07155 0.85 -2.3
1,573,269 + AO353_07155 0.87 -1.5
1,573,269 + AO353_07155 0.87 -0.5
1,573,316 + -1.9
1,573,316 + +1.9
1,573,316 + -1.3
1,573,405 + -1.5
1,573,406 - -1.8
1,573,443 + -1.5
1,573,446 + +0.3
1,573,446 + -0.3
1,573,447 - +0.4
1,573,447 - -0.6
1,573,485 + -0.7
1,573,485 + +0.5
1,573,485 + +0.9
1,573,485 + +0.9
1,573,485 + +0.1
1,573,485 + +0.1
1,573,503 + +0.1
1,573,503 + -1.0
1,573,504 - -0.7
1,573,504 - -1.8
1,573,506 + -0.3
1,573,506 + -1.5
1,573,506 + +0.4
1,573,506 + -1.2
1,573,506 + +0.0
1,573,506 + -0.1
1,573,532 + -0.2
1,573,532 + -0.6
1,573,532 + +0.4
1,573,532 + -0.7
1,573,536 + +0.8
1,573,536 + +0.2
1,573,536 + -0.0
1,573,970 + +1.0
1,573,970 + +0.8
1,573,970 + +0.6
1,573,970 + -0.4
1,573,970 + -1.0
1,573,970 + +1.6
1,573,970 + -0.6
1,573,971 - -1.4
1,573,971 - -0.6
1,573,971 - -1.2
1,573,976 + -0.4
1,573,976 + -0.2
1,573,976 + +0.3
1,573,977 - -1.0
1,573,977 - -0.0
1,573,977 - +0.2
1,573,977 - -0.0
1,573,977 - -0.3
1,573,977 - -3.0
1,573,977 - -0.4
1,573,977 - +0.4
1,573,977 - -0.4
1,573,977 - +0.2
1,573,977 - +0.6
1,573,977 - +0.4
1,573,977 - +0.6
1,573,980 + -0.0
1,573,981 - +2.6
1,573,999 + +0.3
1,573,999 + -0.6
1,573,999 + -0.3
1,574,000 - +0.2
1,574,201 - AO353_07165 0.20 +0.4

Or see this region's nucleotide sequence