Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06715 and AO353_06720 overlap by 4 nucleotides AO353_06720 and AO353_06725 are separated by 128 nucleotides AO353_06725 and AO353_06730 overlap by 4 nucleotides
AO353_06715: AO353_06715 - diaminohydroxyphosphoribosylaminopyrimidine deaminase, at 1,494,652 to 1,495,785
_06715
AO353_06720: AO353_06720 - NrdR family transcriptional regulator, at 1,495,782 to 1,496,246
_06720
AO353_06725: AO353_06725 - hypothetical protein, at 1,496,375 to 1,496,836
_06725
AO353_06730: AO353_06730 - methyltransferase, at 1,496,833 to 1,497,489
_06730
Position (kb)
1495
1496
1497 Strain fitness (log2 ratio)
-2
-1
0
1 at 1495.746 kb on - strand at 1495.746 kb on - strand at 1495.746 kb on - strand at 1495.746 kb on - strand at 1495.746 kb on - strand at 1495.778 kb on - strand at 1495.778 kb on - strand at 1495.856 kb on - strand, within AO353_06720 at 1495.876 kb on + strand, within AO353_06720 at 1495.877 kb on - strand, within AO353_06720 at 1495.877 kb on - strand, within AO353_06720 at 1495.877 kb on - strand, within AO353_06720 at 1496.308 kb on + strand at 1496.309 kb on - strand at 1496.322 kb on + strand at 1496.322 kb on + strand at 1496.322 kb on + strand at 1496.322 kb on + strand at 1496.322 kb on + strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.323 kb on - strand at 1496.333 kb on + strand at 1496.333 kb on + strand at 1496.334 kb on - strand at 1496.334 kb on - strand at 1496.334 kb on - strand at 1496.397 kb on + strand at 1496.397 kb on + strand at 1496.397 kb on + strand at 1496.398 kb on - strand at 1496.398 kb on - strand at 1496.398 kb on - strand at 1496.398 kb on - strand at 1496.398 kb on - strand at 1496.428 kb on + strand, within AO353_06725 at 1496.428 kb on + strand, within AO353_06725 at 1496.428 kb on + strand, within AO353_06725 at 1496.429 kb on - strand, within AO353_06725 at 1496.528 kb on + strand, within AO353_06725 at 1496.864 kb on + strand at 1496.865 kb on - strand at 1497.004 kb on + strand, within AO353_06730 at 1497.004 kb on + strand, within AO353_06730 at 1497.005 kb on - strand, within AO353_06730 at 1497.005 kb on - strand, within AO353_06730 at 1497.005 kb on - strand, within AO353_06730 at 1497.230 kb on - strand, within AO353_06730 at 1497.230 kb on - strand, within AO353_06730 at 1497.230 kb on - strand, within AO353_06730 at 1497.230 kb on - strand, within AO353_06730
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 1,495,746 - -0.7 1,495,746 - +0.9 1,495,746 - -0.9 1,495,746 - -0.4 1,495,746 - -0.5 1,495,778 - +0.5 1,495,778 - -0.3 1,495,856 - AO353_06720 0.16 -0.2 1,495,876 + AO353_06720 0.20 -1.8 1,495,877 - AO353_06720 0.20 -0.7 1,495,877 - AO353_06720 0.20 -0.5 1,495,877 - AO353_06720 0.20 +0.4 1,496,308 + +1.2 1,496,309 - -0.4 1,496,322 + -0.5 1,496,322 + -1.9 1,496,322 + +1.3 1,496,322 + +0.7 1,496,322 + +0.8 1,496,323 - -0.5 1,496,323 - -1.1 1,496,323 - -0.5 1,496,323 - -1.5 1,496,323 - +1.5 1,496,323 - -0.2 1,496,323 - -0.4 1,496,323 - -0.1 1,496,323 - -1.6 1,496,323 - +0.2 1,496,333 + -0.0 1,496,333 + +0.7 1,496,334 - +0.4 1,496,334 - +0.2 1,496,334 - +0.6 1,496,397 + +0.5 1,496,397 + -0.8 1,496,397 + +0.3 1,496,398 - +0.3 1,496,398 - +0.3 1,496,398 - +0.8 1,496,398 - -0.8 1,496,398 - +0.5 1,496,428 + AO353_06725 0.11 +0.0 1,496,428 + AO353_06725 0.11 +0.7 1,496,428 + AO353_06725 0.11 +0.1 1,496,429 - AO353_06725 0.12 -1.5 1,496,528 + AO353_06725 0.33 -0.1 1,496,864 + -0.1 1,496,865 - +0.8 1,497,004 + AO353_06730 0.26 -0.4 1,497,004 + AO353_06730 0.26 -0.2 1,497,005 - AO353_06730 0.26 +0.0 1,497,005 - AO353_06730 0.26 +1.0 1,497,005 - AO353_06730 0.26 +0.9 1,497,230 - AO353_06730 0.60 +0.3 1,497,230 - AO353_06730 0.60 +0.8 1,497,230 - AO353_06730 0.60 -0.2 1,497,230 - AO353_06730 0.60 +0.5
Or see this region's nucleotide sequence