Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05310 and AO353_05315 are separated by 14 nucleotides AO353_05315 and AO353_05320 are separated by 346 nucleotides AO353_05320 and AO353_05325 are separated by 11 nucleotides AO353_05325 and AO353_05330 are separated by 106 nucleotides
AO353_05310: AO353_05310 - phospholipase, at 1,169,060 to 1,170,679
_05310
AO353_05315: AO353_05315 - hypothetical protein, at 1,170,694 to 1,170,885
_05315
AO353_05320: AO353_05320 - hypothetical protein, at 1,171,232 to 1,171,582
_05320
AO353_05325: AO353_05325 - GntR family transcriptional regulator, at 1,171,594 to 1,172,340
_05325
AO353_05330: AO353_05330 - ABC transporter ATP-binding protein, at 1,172,447 to 1,174,174
_05330
Position (kb)
1171
1172
1173 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1170.700 kb on - strand at 1170.700 kb on - strand at 1170.700 kb on - strand at 1170.889 kb on + strand at 1170.889 kb on + strand at 1170.889 kb on + strand at 1170.889 kb on + strand at 1170.889 kb on + strand at 1170.890 kb on - strand at 1170.890 kb on - strand at 1170.890 kb on - strand at 1170.890 kb on - strand at 1170.890 kb on - strand at 1170.891 kb on + strand at 1170.891 kb on + strand at 1170.891 kb on + strand at 1170.891 kb on + strand at 1170.891 kb on + strand at 1170.892 kb on - strand at 1170.948 kb on + strand at 1170.949 kb on - strand at 1170.949 kb on - strand at 1170.949 kb on - strand at 1170.949 kb on - strand at 1170.964 kb on + strand at 1170.964 kb on + strand at 1170.964 kb on + strand at 1170.964 kb on + strand at 1170.964 kb on + strand at 1170.965 kb on - strand at 1170.965 kb on - strand at 1170.965 kb on - strand at 1170.965 kb on - strand at 1170.980 kb on - strand at 1171.098 kb on + strand at 1171.098 kb on + strand at 1171.136 kb on + strand at 1171.136 kb on + strand at 1171.136 kb on + strand at 1171.136 kb on + strand at 1171.136 kb on + strand at 1171.137 kb on - strand at 1171.137 kb on - strand at 1171.140 kb on + strand at 1171.140 kb on + strand at 1171.140 kb on + strand at 1171.140 kb on + strand at 1171.140 kb on + strand at 1171.140 kb on + strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.141 kb on - strand at 1171.194 kb on - strand at 1171.216 kb on + strand at 1171.217 kb on - strand at 1171.295 kb on + strand, within AO353_05320 at 1171.296 kb on - strand, within AO353_05320 at 1171.296 kb on - strand, within AO353_05320 at 1171.296 kb on - strand, within AO353_05320 at 1171.296 kb on - strand, within AO353_05320 at 1171.308 kb on + strand, within AO353_05320 at 1171.308 kb on + strand, within AO353_05320 at 1171.308 kb on + strand, within AO353_05320 at 1171.308 kb on + strand, within AO353_05320 at 1171.308 kb on + strand, within AO353_05320 at 1171.309 kb on - strand, within AO353_05320 at 1171.309 kb on - strand, within AO353_05320 at 1171.309 kb on - strand, within AO353_05320 at 1171.309 kb on - strand, within AO353_05320 at 1171.309 kb on - strand, within AO353_05320 at 1171.357 kb on - strand, within AO353_05320 at 1171.357 kb on - strand, within AO353_05320 at 1171.365 kb on + strand, within AO353_05320 at 1171.365 kb on + strand, within AO353_05320 at 1171.366 kb on - strand, within AO353_05320 at 1171.366 kb on - strand, within AO353_05320 at 1171.376 kb on - strand, within AO353_05320 at 1171.408 kb on + strand, within AO353_05320 at 1171.408 kb on + strand, within AO353_05320 at 1171.408 kb on + strand, within AO353_05320 at 1171.409 kb on - strand, within AO353_05320 at 1171.409 kb on - strand, within AO353_05320 at 1171.409 kb on - strand, within AO353_05320 at 1171.425 kb on + strand, within AO353_05320 at 1171.425 kb on + strand, within AO353_05320 at 1171.425 kb on + strand, within AO353_05320 at 1171.425 kb on + strand, within AO353_05320 at 1171.426 kb on - strand, within AO353_05320 at 1171.426 kb on - strand, within AO353_05320 at 1171.426 kb on - strand, within AO353_05320 at 1171.426 kb on - strand, within AO353_05320 at 1171.506 kb on + strand, within AO353_05320 at 1171.506 kb on + strand, within AO353_05320 at 1171.506 kb on + strand, within AO353_05320 at 1171.506 kb on + strand, within AO353_05320 at 1171.506 kb on + strand, within AO353_05320 at 1171.506 kb on + strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.507 kb on - strand, within AO353_05320 at 1171.514 kb on + strand, within AO353_05320 at 1171.514 kb on + strand, within AO353_05320 at 1171.514 kb on + strand, within AO353_05320 at 1171.514 kb on + strand, within AO353_05320 at 1171.514 kb on + strand, within AO353_05320 at 1171.514 kb on + strand, within AO353_05320 at 1171.515 kb on - strand, within AO353_05320 at 1171.515 kb on - strand, within AO353_05320 at 1171.548 kb on + strand at 1171.548 kb on + strand at 1171.548 kb on + strand at 1171.548 kb on + strand at 1171.549 kb on - strand at 1171.549 kb on - strand at 1171.549 kb on - strand at 1171.549 kb on - strand at 1171.580 kb on + strand at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.745 kb on + strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.746 kb on - strand, within AO353_05325 at 1171.791 kb on + strand, within AO353_05325 at 1172.381 kb on + strand at 1172.381 kb on + strand at 1172.381 kb on + strand at 1172.381 kb on + strand at 1172.382 kb on - strand at 1172.448 kb on + strand at 1172.449 kb on - strand at 1172.580 kb on + strand at 1172.581 kb on - strand at 1172.581 kb on - strand at 1172.581 kb on - strand at 1172.581 kb on - strand at 1172.581 kb on - strand at 1172.581 kb on - strand at 1172.581 kb on - strand at 1172.631 kb on + strand, within AO353_05330 at 1172.631 kb on + strand, within AO353_05330 at 1172.631 kb on + strand, within AO353_05330 at 1172.631 kb on + strand, within AO353_05330 at 1172.631 kb on + strand, within AO353_05330 at 1172.631 kb on + strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.632 kb on - strand, within AO353_05330 at 1172.649 kb on + strand, within AO353_05330 at 1172.775 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.790 kb on + strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.791 kb on - strand, within AO353_05330 at 1172.812 kb on - strand, within AO353_05330 at 1172.993 kb on + strand, within AO353_05330 at 1173.010 kb on + strand, within AO353_05330 at 1173.181 kb on - strand, within AO353_05330 at 1173.273 kb on + strand, within AO353_05330 at 1173.274 kb on - strand, within AO353_05330 at 1173.304 kb on + strand, within AO353_05330 at 1173.304 kb on + strand, within AO353_05330 at 1173.305 kb on - strand, within AO353_05330 at 1173.305 kb on - strand, within AO353_05330 at 1173.305 kb on - strand, within AO353_05330 at 1173.305 kb on - strand, within AO353_05330 at 1173.305 kb on - strand, within AO353_05330 at 1173.305 kb on - strand, within AO353_05330 at 1173.331 kb on + strand, within AO353_05330 at 1173.331 kb on + strand, within AO353_05330 at 1173.331 kb on + strand, within AO353_05330 at 1173.332 kb on - strand, within AO353_05330 at 1173.332 kb on - strand, within AO353_05330
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 1,170,700 - -1.8 1,170,700 - +0.1 1,170,700 - +0.2 1,170,889 + +0.9 1,170,889 + +1.2 1,170,889 + +0.5 1,170,889 + -2.8 1,170,889 + -0.1 1,170,890 - +0.0 1,170,890 - -0.3 1,170,890 - -0.4 1,170,890 - +0.8 1,170,890 - +0.4 1,170,891 + -0.4 1,170,891 + -0.9 1,170,891 + -0.8 1,170,891 + -0.2 1,170,891 + +0.7 1,170,892 - +1.4 1,170,948 + +0.8 1,170,949 - -1.4 1,170,949 - +0.4 1,170,949 - +0.6 1,170,949 - +0.7 1,170,964 + +0.1 1,170,964 + +1.7 1,170,964 + -1.4 1,170,964 + +0.1 1,170,964 + +1.4 1,170,965 - -0.7 1,170,965 - +0.8 1,170,965 - +0.2 1,170,965 - -0.2 1,170,980 - +1.7 1,171,098 + -0.5 1,171,098 + +0.6 1,171,136 + +0.1 1,171,136 + +1.0 1,171,136 + +1.1 1,171,136 + -2.5 1,171,136 + +1.4 1,171,137 - -0.6 1,171,137 - -1.5 1,171,140 + +1.2 1,171,140 + -1.8 1,171,140 + -0.2 1,171,140 + -1.2 1,171,140 + +0.4 1,171,140 + +1.8 1,171,141 - +0.4 1,171,141 - +0.4 1,171,141 - +0.5 1,171,141 - -0.6 1,171,141 - -2.1 1,171,141 - +0.6 1,171,141 - +0.0 1,171,141 - +1.1 1,171,141 - -1.0 1,171,141 - -0.1 1,171,141 - -0.7 1,171,141 - -0.3 1,171,194 - +0.0 1,171,216 + +0.9 1,171,217 - -0.0 1,171,295 + AO353_05320 0.18 +0.4 1,171,296 - AO353_05320 0.18 +1.8 1,171,296 - AO353_05320 0.18 +0.2 1,171,296 - AO353_05320 0.18 +1.4 1,171,296 - AO353_05320 0.18 +0.7 1,171,308 + AO353_05320 0.22 +0.2 1,171,308 + AO353_05320 0.22 +0.1 1,171,308 + AO353_05320 0.22 +0.2 1,171,308 + AO353_05320 0.22 -0.0 1,171,308 + AO353_05320 0.22 +0.4 1,171,309 - AO353_05320 0.22 -1.4 1,171,309 - AO353_05320 0.22 -0.1 1,171,309 - AO353_05320 0.22 +2.1 1,171,309 - AO353_05320 0.22 -0.8 1,171,309 - AO353_05320 0.22 +0.6 1,171,357 - AO353_05320 0.36 +1.2 1,171,357 - AO353_05320 0.36 -0.7 1,171,365 + AO353_05320 0.38 -0.1 1,171,365 + AO353_05320 0.38 +0.1 1,171,366 - AO353_05320 0.38 +0.6 1,171,366 - AO353_05320 0.38 -0.0 1,171,376 - AO353_05320 0.41 -0.8 1,171,408 + AO353_05320 0.50 -0.7 1,171,408 + AO353_05320 0.50 +0.6 1,171,408 + AO353_05320 0.50 -0.0 1,171,409 - AO353_05320 0.50 -0.1 1,171,409 - AO353_05320 0.50 -1.4 1,171,409 - AO353_05320 0.50 -0.3 1,171,425 + AO353_05320 0.55 -0.8 1,171,425 + AO353_05320 0.55 +0.3 1,171,425 + AO353_05320 0.55 -2.6 1,171,425 + AO353_05320 0.55 -0.9 1,171,426 - AO353_05320 0.55 -1.2 1,171,426 - AO353_05320 0.55 +0.4 1,171,426 - AO353_05320 0.55 +0.0 1,171,426 - AO353_05320 0.55 -0.1 1,171,506 + AO353_05320 0.78 +1.4 1,171,506 + AO353_05320 0.78 -0.7 1,171,506 + AO353_05320 0.78 -0.2 1,171,506 + AO353_05320 0.78 +1.4 1,171,506 + AO353_05320 0.78 -0.2 1,171,506 + AO353_05320 0.78 -1.2 1,171,507 - AO353_05320 0.78 -0.0 1,171,507 - AO353_05320 0.78 +1.1 1,171,507 - AO353_05320 0.78 -1.1 1,171,507 - AO353_05320 0.78 -2.6 1,171,507 - AO353_05320 0.78 +1.4 1,171,507 - AO353_05320 0.78 -0.6 1,171,507 - AO353_05320 0.78 -0.9 1,171,514 + AO353_05320 0.80 -2.1 1,171,514 + AO353_05320 0.80 -1.2 1,171,514 + AO353_05320 0.80 +0.1 1,171,514 + AO353_05320 0.80 +0.6 1,171,514 + AO353_05320 0.80 -2.0 1,171,514 + AO353_05320 0.80 -0.9 1,171,515 - AO353_05320 0.81 -1.2 1,171,515 - AO353_05320 0.81 -0.7 1,171,548 + -0.8 1,171,548 + -0.7 1,171,548 + +0.3 1,171,548 + -0.6 1,171,549 - +0.8 1,171,549 - -0.6 1,171,549 - -0.2 1,171,549 - -0.4 1,171,580 + +1.1 1,171,745 + AO353_05325 0.20 +0.4 1,171,745 + AO353_05325 0.20 -2.5 1,171,745 + AO353_05325 0.20 -0.6 1,171,745 + AO353_05325 0.20 -0.1 1,171,745 + AO353_05325 0.20 +1.1 1,171,745 + AO353_05325 0.20 -1.4 1,171,745 + AO353_05325 0.20 -0.6 1,171,745 + AO353_05325 0.20 -0.2 1,171,745 + AO353_05325 0.20 +0.1 1,171,745 + AO353_05325 0.20 -0.8 1,171,745 + AO353_05325 0.20 -1.4 1,171,745 + AO353_05325 0.20 -0.6 1,171,746 - AO353_05325 0.20 +0.2 1,171,746 - AO353_05325 0.20 -0.4 1,171,746 - AO353_05325 0.20 -1.2 1,171,746 - AO353_05325 0.20 -1.8 1,171,746 - AO353_05325 0.20 -2.1 1,171,746 - AO353_05325 0.20 -1.8 1,171,746 - AO353_05325 0.20 -1.4 1,171,746 - AO353_05325 0.20 -0.0 1,171,746 - AO353_05325 0.20 -0.6 1,171,791 + AO353_05325 0.26 -0.6 1,172,381 + -0.3 1,172,381 + -0.1 1,172,381 + -2.3 1,172,381 + -0.9 1,172,382 - -1.1 1,172,448 + -0.8 1,172,449 - -0.2 1,172,580 + +0.2 1,172,581 - +0.4 1,172,581 - +0.1 1,172,581 - +0.6 1,172,581 - +0.5 1,172,581 - -2.6 1,172,581 - +0.7 1,172,581 - +0.5 1,172,631 + AO353_05330 0.11 +0.6 1,172,631 + AO353_05330 0.11 +0.6 1,172,631 + AO353_05330 0.11 -0.0 1,172,631 + AO353_05330 0.11 -2.3 1,172,631 + AO353_05330 0.11 -2.2 1,172,631 + AO353_05330 0.11 +0.5 1,172,632 - AO353_05330 0.11 +0.1 1,172,632 - AO353_05330 0.11 +1.7 1,172,632 - AO353_05330 0.11 +1.4 1,172,632 - AO353_05330 0.11 -0.1 1,172,632 - AO353_05330 0.11 +0.1 1,172,632 - AO353_05330 0.11 -0.5 1,172,632 - AO353_05330 0.11 +0.2 1,172,632 - AO353_05330 0.11 +0.8 1,172,632 - AO353_05330 0.11 -1.3 1,172,649 + AO353_05330 0.12 +0.3 1,172,775 + AO353_05330 0.19 +0.1 1,172,790 + AO353_05330 0.20 -0.8 1,172,790 + AO353_05330 0.20 -1.2 1,172,790 + AO353_05330 0.20 +1.4 1,172,790 + AO353_05330 0.20 -0.8 1,172,790 + AO353_05330 0.20 +0.3 1,172,790 + AO353_05330 0.20 +0.3 1,172,790 + AO353_05330 0.20 +1.4 1,172,790 + AO353_05330 0.20 -0.3 1,172,790 + AO353_05330 0.20 -1.1 1,172,791 - AO353_05330 0.20 +1.4 1,172,791 - AO353_05330 0.20 -0.0 1,172,791 - AO353_05330 0.20 -2.4 1,172,791 - AO353_05330 0.20 -1.4 1,172,791 - AO353_05330 0.20 +0.7 1,172,791 - AO353_05330 0.20 +0.1 1,172,791 - AO353_05330 0.20 -0.8 1,172,791 - AO353_05330 0.20 -0.8 1,172,791 - AO353_05330 0.20 -0.5 1,172,812 - AO353_05330 0.21 -0.3 1,172,993 + AO353_05330 0.32 -0.7 1,173,010 + AO353_05330 0.33 -0.2 1,173,181 - AO353_05330 0.42 -1.2 1,173,273 + AO353_05330 0.48 +0.4 1,173,274 - AO353_05330 0.48 +0.3 1,173,304 + AO353_05330 0.50 -0.9 1,173,304 + AO353_05330 0.50 +0.0 1,173,305 - AO353_05330 0.50 +0.3 1,173,305 - AO353_05330 0.50 -0.4 1,173,305 - AO353_05330 0.50 -0.5 1,173,305 - AO353_05330 0.50 -1.4 1,173,305 - AO353_05330 0.50 -0.8 1,173,305 - AO353_05330 0.50 +0.5 1,173,331 + AO353_05330 0.51 -0.6 1,173,331 + AO353_05330 0.51 -0.2 1,173,331 + AO353_05330 0.51 +0.1 1,173,332 - AO353_05330 0.51 -0.7 1,173,332 - AO353_05330 0.51 -1.1
Or see this region's nucleotide sequence