Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3860

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,635,750	-		Shewana3_3858	0.26	-0.1
4,635,754	+		Shewana3_3858	0.28	-1.5
4,635,754	+		Shewana3_3858	0.28	-0.5
4,635,762	-		Shewana3_3858	0.30	-0.6
4,635,792	+		Shewana3_3858	0.40	-1.5
4,635,800	-		Shewana3_3858	0.43	-0.1
4,635,800	-		Shewana3_3858	0.43	-0.6
4,635,826	-		Shewana3_3858	0.51	+0.1
4,635,827	+		Shewana3_3858	0.52	-0.5
4,635,835	-		Shewana3_3858	0.54	-0.4
4,635,839	+		Shewana3_3858	0.56	-3.0
4,635,847	-		Shewana3_3858	0.58	+0.2
4,635,862	-		Shewana3_3858	0.63	-0.1
4,635,897	-		Shewana3_3858	0.75	+0.2
4,635,929	+		Shewana3_3858	0.85	+0.1
4,635,929	+		Shewana3_3858	0.85	-0.9
4,635,929	+		Shewana3_3858	0.85	-0.9
4,635,937	-		Shewana3_3858	0.88	-0.0
4,635,937	-		Shewana3_3858	0.88	+0.4
4,635,937	-		Shewana3_3858	0.88	+0.1
4,635,937	-		Shewana3_3858	0.88	+0.2
4,636,000	-				-0.2
4,636,013	+				-2.1
4,636,021	-				+0.5
4,636,083	-				-0.1
4,636,097	+				-1.5
4,636,138	-				+0.1
4,636,167	-				+0.3
4,636,370	+		Shewana3_3859	0.50	-2.3
4,636,375	+		Shewana3_3859	0.52	-1.7
4,636,422	+		Shewana3_3859	0.67	-0.5
4,636,430	-		Shewana3_3859	0.70	-0.2
4,636,430	-		Shewana3_3859	0.70	-2.9
4,636,704	-				+0.0
4,636,847	-		Shewana3_3860	0.22	-0.7
4,636,879	-		Shewana3_3860	0.28	-0.5
4,636,998	+		Shewana3_3860	0.50	-0.8
4,637,073	-		Shewana3_3860	0.64	-1.1
4,637,158	-		Shewana3_3860	0.80	+0.0
4,637,206	-		Shewana3_3860	0.89	-1.0
4,637,206	-		Shewana3_3860	0.89	-0.6
4,637,209	-		Shewana3_3860	0.89	-0.1
4,637,309	-				-0.5
4,637,447	+				-2.1
4,637,448	-				-2.9
4,637,460	+				-3.0
4,637,460	+				-2.2
4,637,460	+				+0.5
4,637,532	-		Shewana3_3861	0.16	-0.9
4,637,657	+		Shewana3_3861	0.29	-3.3
4,637,672	-		Shewana3_3861	0.31	-0.9
4,637,731	+		Shewana3_3861	0.37	-2.4
4,637,758	-		Shewana3_3861	0.40	-1.4
4,637,798	-		Shewana3_3861	0.44	-2.9
4,637,798	-		Shewana3_3861	0.44	-1.9
4,637,859	+		Shewana3_3861	0.50	-3.7
4,637,859	+		Shewana3_3861	0.50	-1.1
4,637,859	+				+0.7
4,637,859	+		Shewana3_3861	0.50	-1.3
4,637,867	-		Shewana3_3861	0.51	-1.7
4,637,867	-		Shewana3_3861	0.51	-0.2
4,637,886	-		Shewana3_3861	0.53	-1.8
4,637,911	+		Shewana3_3861	0.56	+1.7
4,637,919	-		Shewana3_3861	0.56	-1.7
4,637,919	-		Shewana3_3861	0.56	-1.6
4,637,924	+		Shewana3_3861	0.57	-4.6
4,637,933	-		Shewana3_3861	0.58	+0.6
4,638,005	-		Shewana3_3861	0.65	-0.5
4,638,115	+		Shewana3_3861	0.77	-1.2
4,638,260	+				-1.0
4,638,260	-				+1.0