Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3808

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,572,701	-				+0.2
4,572,917	-		Shewana3_3807	0.26	+0.7
4,573,135	+		Shewana3_3807	0.46	-0.6
4,573,190	+		Shewana3_3807	0.51	-0.6
4,573,190	+		Shewana3_3807	0.51	-1.6
4,573,190	+		Shewana3_3807	0.51	-0.9
4,573,198	+		Shewana3_3807	0.52	-0.9
4,573,198	-		Shewana3_3807	0.52	+0.4
4,573,323	-		Shewana3_3807	0.64	+0.3
4,573,356	+		Shewana3_3807	0.67	-0.2
4,573,443	-		Shewana3_3807	0.75	+0.7
4,573,575	+		Shewana3_3807	0.88	-1.3
4,573,578	-		Shewana3_3807	0.88	+0.5
4,573,756	+				-1.2
4,573,766	+				-0.9
4,573,774	-				+0.5
4,573,781	+				-1.3
4,573,873	-		Shewana3_3808	0.20	+0.6
4,573,914	-		Shewana3_3808	0.25	+0.6
4,573,977	-		Shewana3_3808	0.32	+0.2
4,573,979	-		Shewana3_3808	0.32	+0.4
4,574,059	-		Shewana3_3808	0.41	+0.9
4,574,080	-		Shewana3_3808	0.44	+0.5
4,574,105	-		Shewana3_3808	0.46	+0.8
4,574,210	-		Shewana3_3808	0.58	+0.2
4,574,292	+		Shewana3_3808	0.68	+0.2
4,574,292	+		Shewana3_3808	0.68	-0.7
4,574,528	+				+0.1
4,574,536	-				+0.4
4,574,623	-				+0.1
4,574,630	-				+0.2
4,574,698	-				+0.8
4,574,715	+				-1.4
4,574,809	-				-0.5
4,574,809	-				+0.7
4,574,913	-		Shewana3_3809	0.13	+1.0
4,574,974	-		Shewana3_3809	0.17	+0.6
4,574,981	+		Shewana3_3809	0.18	-1.8
4,575,010	-		Shewana3_3809	0.20	+1.1
4,575,010	-		Shewana3_3809	0.20	+0.7
4,575,070	-		Shewana3_3809	0.24	+0.5
4,575,070	-		Shewana3_3809	0.24	+0.2
4,575,193	-		Shewana3_3809	0.32	+0.3
4,575,234	-		Shewana3_3809	0.34	+0.2
4,575,264	-		Shewana3_3809	0.36	+0.7
4,575,286	+		Shewana3_3809	0.38	-0.7
4,575,286	+		Shewana3_3809	0.38	-1.1
4,575,294	-		Shewana3_3809	0.38	-1.0
4,575,294	-		Shewana3_3809	0.38	+0.2
4,575,356	+		Shewana3_3809	0.43	-0.0
4,575,356	+		Shewana3_3809	0.43	+0.0
4,575,356	+		Shewana3_3809	0.43	+0.2
4,575,356	+		Shewana3_3809	0.43	-0.2
4,575,374	-		Shewana3_3809	0.44	+0.5
4,575,400	-		Shewana3_3809	0.46	-0.1
4,575,433	-		Shewana3_3809	0.48	+1.1
4,575,462	+		Shewana3_3809	0.50	+0.5
4,575,508	-		Shewana3_3809	0.53	-0.7
4,575,525	+		Shewana3_3809	0.54	-0.2
4,575,553	+		Shewana3_3809	0.56	-0.0