Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3681
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,419,414 | + | Shewana3_3680 | 0.25 | -1.6 | |
4,419,422 | - | Shewana3_3680 | 0.26 | +0.8 | |
4,419,472 | + | Shewana3_3680 | 0.33 | -0.8 | |
4,419,493 | - | Shewana3_3680 | 0.36 | +1.2 | |
4,419,613 | - | Shewana3_3680 | 0.52 | +1.7 | |
4,419,694 | - | Shewana3_3680 | 0.62 | +1.1 | |
4,419,705 | - | Shewana3_3680 | 0.64 | +0.6 | |
4,419,705 | - | Shewana3_3680 | 0.64 | +0.6 | |
4,419,705 | - | Shewana3_3680 | 0.64 | +1.1 | |
4,419,804 | + | Shewana3_3680 | 0.77 | -1.8 | |
4,419,864 | + | Shewana3_3680 | 0.85 | -1.5 | |
4,420,055 | - | +0.4 | |||
4,420,061 | - | +0.6 | |||
4,420,207 | - | +1.1 | |||
4,420,280 | + | +0.5 | |||
4,420,280 | + | +0.8 | |||
4,420,280 | + | +0.1 | |||
4,420,338 | + | +0.5 | |||
4,420,346 | - | +0.7 | |||
4,420,346 | - | +0.7 | |||
4,420,533 | + | Shewana3_3681 | 0.66 | +0.7 | |
4,420,765 | - | +0.7 | |||
4,420,788 | + | Shewana3_3682 | 0.11 | -1.1 | |
4,420,813 | - | Shewana3_3682 | 0.13 | +0.7 | |
4,420,999 | + | Shewana3_3682 | 0.28 | -0.9 | |
4,421,018 | - | Shewana3_3682 | 0.30 | +0.6 | |
4,421,265 | - | Shewana3_3682 | 0.51 | +0.4 | |
4,421,297 | + | Shewana3_3682 | 0.54 | -0.7 | |
4,421,331 | - | Shewana3_3682 | 0.57 | +0.4 | |
4,421,388 | - | Shewana3_3682 | 0.62 | +0.2 | |
4,421,423 | - | Shewana3_3682 | 0.65 | +0.8 |
Or see this region's nucleotide sequence