Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3649

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,384,714	+				+0.6
4,384,726	+				-0.5
4,384,750	+				-1.0
4,384,768	-				+0.3
4,384,791	-				+0.7
4,384,995	+		Shewana3_3649	0.14	-1.3
4,385,086	-		Shewana3_3649	0.17	-0.3
4,385,116	+		Shewana3_3649	0.17	-0.5
4,385,124	-		Shewana3_3649	0.18	+0.4
4,385,321	-		Shewana3_3649	0.23	-0.5
4,385,534	+		Shewana3_3649	0.29	-0.2
4,385,632	+		Shewana3_3649	0.31	-0.3
4,385,722	-		Shewana3_3649	0.34	-0.2
4,385,758	-		Shewana3_3649	0.35	-0.1
4,385,768	-		Shewana3_3649	0.35	-0.4
4,385,770	+		Shewana3_3649	0.35	-0.3
4,385,818	-		Shewana3_3649	0.36	+0.2
4,385,855	-		Shewana3_3649	0.37	+0.4
4,385,985	-		Shewana3_3649	0.41	-0.1
4,386,016	+		Shewana3_3649	0.41	-0.5
4,386,022	-		Shewana3_3649	0.42	-0.2
4,386,086	+		Shewana3_3649	0.43	-0.4
4,386,114	-		Shewana3_3649	0.44	-0.3
4,386,335	-		Shewana3_3649	0.50	-0.6
4,386,396	+		Shewana3_3649	0.52	+0.1
4,386,511	+		Shewana3_3649	0.55	+0.7
4,386,739	-		Shewana3_3649	0.61	-0.2
4,386,743	+		Shewana3_3649	0.61	+0.6
4,386,801	-		Shewana3_3649	0.62	+0.2
4,386,818	-		Shewana3_3649	0.63	+0.5
4,386,831	+		Shewana3_3649	0.63	-0.2
4,387,049	-		Shewana3_3649	0.69	-0.6
4,387,054	+		Shewana3_3649	0.69	-0.9
4,387,054	+		Shewana3_3649	0.69	-1.4
4,387,182	-		Shewana3_3649	0.73	-0.9
4,387,211	+		Shewana3_3649	0.73	+1.8
4,387,219	-		Shewana3_3649	0.73	+0.2
4,387,260	-		Shewana3_3649	0.75	-0.2
4,387,298	+		Shewana3_3649	0.76	-2.0
4,387,369	-		Shewana3_3649	0.78	-0.4
4,387,456	-		Shewana3_3649	0.80	-1.3
4,387,489	+		Shewana3_3649	0.81	-2.2
4,387,497	-		Shewana3_3649	0.81	-0.7
4,387,534	-		Shewana3_3649	0.82	-2.8
4,387,578	+		Shewana3_3649	0.83	-0.4
4,387,586	-		Shewana3_3649	0.83	-1.9
4,387,586	-		Shewana3_3649	0.83	-1.9
4,387,634	+		Shewana3_3649	0.85	-0.5
4,387,651	+		Shewana3_3649	0.85	-0.3
4,387,651	+		Shewana3_3649	0.85	-2.1
4,387,651	+		Shewana3_3649	0.85	-0.8
4,387,656	+		Shewana3_3649	0.85	-0.2
4,387,656	+		Shewana3_3649	0.85	-1.2
4,387,659	-		Shewana3_3649	0.85	-1.1
4,387,659	-		Shewana3_3649	0.85	-1.2
4,387,659	-		Shewana3_3649	0.85	-1.4
4,387,659	-		Shewana3_3649	0.85	-1.9
4,387,659	-		Shewana3_3649	0.85	-0.0
4,387,664	-		Shewana3_3649	0.85	+0.3
4,387,664	-		Shewana3_3649	0.85	-0.3
4,387,664	-		Shewana3_3649	0.85	-0.2
4,387,664	-		Shewana3_3649	0.85	-0.6
4,387,664	-		Shewana3_3649	0.85	-2.2
4,387,710	+		Shewana3_3649	0.87	-2.0
4,387,718	-		Shewana3_3649	0.87	-2.1
4,387,718	-		Shewana3_3649	0.87	-1.4
4,387,718	-		Shewana3_3649	0.87	-2.1
4,387,719	+		Shewana3_3649	0.87	-0.9
4,387,720	+		Shewana3_3649	0.87	-1.2
4,387,724	+		Shewana3_3649	0.87	-2.0
4,387,724	+		Shewana3_3649	0.87	-1.5
4,387,725	+		Shewana3_3649	0.87	+0.0
4,387,727	-		Shewana3_3649	0.87	-2.1
4,387,728	-		Shewana3_3649	0.87	-1.0
4,387,728	-		Shewana3_3649	0.87	-1.1
4,387,728	-		Shewana3_3649	0.87	-1.0
4,387,732	-		Shewana3_3649	0.87	-1.6
4,387,732	-		Shewana3_3649	0.87	-0.4
4,387,763	-		Shewana3_3649	0.88	-1.1
4,387,765	-		Shewana3_3649	0.88	+0.7
4,387,789	-		Shewana3_3649	0.89	-0.1
4,387,850	-				-0.6
4,387,869	+				-0.2
4,387,871	-				-1.7
4,387,894	-				-0.5
4,387,971	+				-2.1
4,387,978	+				-2.5
4,387,985	-				-1.4
4,387,993	+				-1.8
4,387,993	+				-0.5
4,387,994	-				-2.1
4,388,001	-				+0.1
4,388,001	-				-1.4
4,388,046	+				-1.5
4,388,132	+				-1.8
4,388,132	+				-0.7
4,388,137	+				-0.8
4,388,145	-				-3.2
4,388,155	-				-2.0
4,388,155	-				-2.9
4,388,176	+				-1.5
4,388,176	+				-1.4
4,388,176	+				-2.0
4,388,184	-				-1.6
4,388,184	-				-2.2
4,388,226	-				-0.8
4,388,246	-				+0.2
4,388,252	+				-1.5
4,388,254	+				-2.6
4,388,276	+				+0.5
4,388,290	-		Shewana3_3650	0.11	-1.6
4,388,332	-		Shewana3_3650	0.20	-0.6
4,388,376	-		Shewana3_3650	0.30	-0.2
4,388,399	-		Shewana3_3650	0.35	-0.6
4,388,646	+		Shewana3_3650	0.88	-1.7
4,388,652	-		Shewana3_3650	0.90	+0.0
4,388,677	+				-1.5
4,388,941	-		Shewana3_3651	0.29	-1.0
4,389,017	-		Shewana3_3651	0.38	-0.0
4,389,038	+		Shewana3_3651	0.41	-0.8
4,389,047	-		Shewana3_3651	0.42	-0.4
4,389,091	+		Shewana3_3651	0.47	-1.5
4,389,099	-		Shewana3_3651	0.48	-0.6
4,389,099	-		Shewana3_3651	0.48	-0.2
4,389,123	+		Shewana3_3651	0.50	-1.2
4,389,180	-		Shewana3_3651	0.57	-1.7