Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3562

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,269,988	-		Shewana3_3561	0.49	-0.9
4,270,034	-		Shewana3_3561	0.52	+0.1
4,270,049	+		Shewana3_3561	0.53	-2.3
4,270,057	-		Shewana3_3561	0.53	+1.0
4,270,110	-		Shewana3_3561	0.57	+0.1
4,270,153	+		Shewana3_3561	0.60	-0.2
4,270,363	+		Shewana3_3561	0.74	+0.3
4,270,511	+		Shewana3_3561	0.83	+0.6
4,270,511	+		Shewana3_3561	0.83	+0.3
4,270,511	+		Shewana3_3561	0.83	+0.2
4,270,518	+		Shewana3_3561	0.84	-0.1
4,270,519	-		Shewana3_3561	0.84	-1.0
4,270,528	+		Shewana3_3561	0.84	+0.2
4,270,529	-		Shewana3_3561	0.85	-0.5
4,270,536	-		Shewana3_3561	0.85	+0.0
4,270,536	-		Shewana3_3561	0.85	-0.1
4,270,536	-		Shewana3_3561	0.85	+0.1
4,270,536	-		Shewana3_3561	0.85	-0.3
4,270,536	-		Shewana3_3561	0.85	+0.9
4,270,536	-		Shewana3_3561	0.85	+0.2
4,270,605	+		Shewana3_3561	0.90	-0.5
4,270,613	-				+0.6
4,270,683	-				-0.1
4,270,688	-				-2.4
4,270,698	+				-0.7
4,270,952	+				-0.9
4,270,952	+				-1.4
4,270,952	+				-1.1
4,270,952	+				-2.5
4,270,953	+				-0.1
4,270,954	-				-0.8
4,270,960	-				+1.2
4,270,960	-				-0.8
4,270,960	-				+0.9
4,270,971	-				+1.2
4,271,065	+		Shewana3_3562	0.19	-0.0
4,271,073	-		Shewana3_3562	0.20	-0.6
4,271,073	-		Shewana3_3562	0.20	-0.1
4,271,073	-		Shewana3_3562	0.20	-0.1
4,271,075	+		Shewana3_3562	0.20	-1.0
4,271,115	+		Shewana3_3562	0.25	-1.7
4,271,156	+		Shewana3_3562	0.30	-2.3
4,271,264	-		Shewana3_3562	0.42	-0.2
4,271,309	-		Shewana3_3562	0.48	-1.1
4,271,311	+		Shewana3_3562	0.48	-2.0
4,271,336	+		Shewana3_3562	0.51	-1.6
4,271,482	+		Shewana3_3562	0.68	-1.4
4,271,502	+		Shewana3_3562	0.71	-0.6
4,271,579	-		Shewana3_3562	0.80	-0.6
4,271,594	-		Shewana3_3562	0.81	-1.0
4,271,596	-		Shewana3_3562	0.82	-0.5
4,271,630	+		Shewana3_3562	0.86	-0.2
4,271,733	-				-0.1
4,271,734	-				+1.5
4,271,776	+				-0.1
4,271,781	+				-0.5
4,271,834	-				-0.2
4,271,876	-				-0.0
4,271,876	-				+0.3
4,271,981	+				+0.1
4,272,003	+				-0.9
4,272,010	-				+0.1
4,272,011	-				-0.5
4,272,011	-				-0.2
4,272,058	+				-2.7
4,272,068	+				+0.2
4,272,068	+				+0.1
4,272,068	+				+0.7
4,272,068	+				-0.9
4,272,076	-				+0.6
4,272,076	-				-0.2
4,272,133	+				-1.5
4,272,157	+				-1.0
4,272,174	+				-1.0
4,272,182	-				-0.9
4,272,182	-				-0.2
4,272,210	-				-0.4
4,272,221	-				+0.1
4,272,231	-				-0.3
4,272,372	+		Shewana3_3563	0.20	-0.8
4,272,418	-		Shewana3_3563	0.24	-1.0
4,272,431	+		Shewana3_3563	0.25	+0.9
4,272,449	-		Shewana3_3563	0.26	-0.4
4,272,568	+		Shewana3_3563	0.36	-1.3
4,272,576	-		Shewana3_3563	0.36	-0.4
4,272,600	-		Shewana3_3563	0.38	-0.9
4,272,616	-		Shewana3_3563	0.39	-0.3
4,272,693	-		Shewana3_3563	0.45	-1.3