Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3539

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,237,112	-				-0.8
4,237,162	-				-0.1
4,237,372	+		Shewana3_3538	0.16	-0.2
4,237,456	+		Shewana3_3538	0.27	+0.3
4,237,459	-		Shewana3_3538	0.28	+0.6
4,237,551	+		Shewana3_3538	0.40	+0.2
4,237,566	+		Shewana3_3538	0.42	+0.6
4,237,566	+		Shewana3_3538	0.42	-1.7
4,237,566	+		Shewana3_3538	0.42	+0.2
4,237,566	+		Shewana3_3538	0.42	+0.0
4,237,566	+		Shewana3_3538	0.42	+1.4
4,237,574	-		Shewana3_3538	0.43	+1.0
4,237,625	+		Shewana3_3538	0.50	+0.7
4,237,679	+		Shewana3_3538	0.57	+0.7
4,237,687	-		Shewana3_3538	0.58	+0.2
4,237,736	+		Shewana3_3538	0.65	+0.4
4,237,862	-		Shewana3_3538	0.82	-0.2
4,237,877	+		Shewana3_3538	0.84	+0.5
4,237,885	+		Shewana3_3538	0.85	+0.7
4,237,935	+				+0.8
4,237,959	-				-0.2
4,238,291	+		Shewana3_3539	0.11	+0.2
4,238,415	+		Shewana3_3539	0.19	-0.2
4,238,473	+		Shewana3_3539	0.22	+0.0
4,238,498	-		Shewana3_3539	0.24	+0.6
4,238,508	-		Shewana3_3539	0.24	+1.0
4,238,559	+		Shewana3_3539	0.28	-0.5
4,238,608	+		Shewana3_3539	0.31	-1.2
4,238,636	-		Shewana3_3539	0.32	+0.5
4,238,644	-		Shewana3_3539	0.33	+0.8
4,238,663	+		Shewana3_3539	0.34	-1.1
4,238,671	-		Shewana3_3539	0.34	+1.0
4,238,815	+		Shewana3_3539	0.43	-3.1
4,238,845	-		Shewana3_3539	0.45	+0.5
4,238,898	+		Shewana3_3539	0.48	+0.2
4,238,913	+		Shewana3_3539	0.49	-0.6
4,238,938	+		Shewana3_3539	0.51	-0.1
4,238,946	-		Shewana3_3539	0.51	+0.4
4,238,992	-		Shewana3_3539	0.54	+0.6
4,239,215	+		Shewana3_3539	0.68	-0.5
4,239,275	-		Shewana3_3539	0.71	+1.0
4,239,312	-		Shewana3_3539	0.73	+0.5
4,239,324	-		Shewana3_3539	0.74	+0.5
4,239,428	-		Shewana3_3539	0.81	+0.5
4,239,430	+		Shewana3_3539	0.81	-1.4
4,239,490	-		Shewana3_3539	0.84	-0.2
4,239,578	-		Shewana3_3539	0.90	-0.6
4,239,612	-				+0.4
4,239,715	-				+1.0
4,239,776	-				+0.6
4,239,885	-				+0.9
4,240,039	+		Shewana3_3540	0.17	-0.1
4,240,039	+		Shewana3_3540	0.17	+0.4
4,240,042	-		Shewana3_3540	0.17	+0.3
4,240,047	-		Shewana3_3540	0.17	+0.4
4,240,047	-		Shewana3_3540	0.17	+1.6
4,240,047	-		Shewana3_3540	0.17	+0.3
4,240,047	-		Shewana3_3540	0.17	-1.0
4,240,213	+		Shewana3_3540	0.28	-0.7
4,240,265	-		Shewana3_3540	0.32	+0.3
4,240,417	+		Shewana3_3540	0.42	-0.9
4,240,417	+		Shewana3_3540	0.42	-0.4
4,240,425	-		Shewana3_3540	0.42	+0.4
4,240,425	-		Shewana3_3540	0.42	+0.4
4,240,530	+		Shewana3_3540	0.49	+0.7
4,240,708	-		Shewana3_3540	0.61	+0.0