Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3523

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,222,580	-				+0.8
4,222,868	+		Shewana3_3522	0.18	-1.1
4,222,868	+		Shewana3_3522	0.18	-0.3
4,222,876	-		Shewana3_3522	0.20	-0.2
4,222,876	-		Shewana3_3522	0.20	-0.2
4,222,876	-		Shewana3_3522	0.20	-0.6
4,222,965	-		Shewana3_3522	0.35	-0.4
4,223,004	+		Shewana3_3522	0.41	+0.3
4,223,004	+		Shewana3_3522	0.41	-0.8
4,223,012	-		Shewana3_3522	0.43	+0.3
4,223,012	-		Shewana3_3522	0.43	-1.7
4,223,012	-		Shewana3_3522	0.43	-0.5
4,223,012	-		Shewana3_3522	0.43	+0.5
4,223,085	+		Shewana3_3522	0.55	-2.2
4,223,182	+		Shewana3_3522	0.71	+0.2
4,223,190	-		Shewana3_3522	0.73	-0.4
4,223,213	-		Shewana3_3522	0.76	-0.1
4,223,243	+		Shewana3_3522	0.81	+0.2
4,223,328	-				+0.3
4,223,329	-				-0.1
4,223,329	-				+0.4
4,223,329	-				+0.5
4,223,483	-				-0.0
4,223,579	+		Shewana3_3523	0.14	-1.7
4,223,584	+		Shewana3_3523	0.15	-1.0
4,223,618	-		Shewana3_3523	0.17	-1.6
4,223,618	-		Shewana3_3523	0.17	-0.3
4,223,628	-		Shewana3_3523	0.18	-1.9
4,223,652	+		Shewana3_3523	0.19	-1.2
4,223,677	+		Shewana3_3523	0.21	-0.2
4,223,709	+		Shewana3_3523	0.23	-0.7
4,223,856	+		Shewana3_3523	0.33	+0.0
4,223,864	-		Shewana3_3523	0.34	+0.5
4,223,919	-		Shewana3_3523	0.37	-0.1
4,223,920	-		Shewana3_3523	0.37	-0.1
4,224,013	+		Shewana3_3523	0.44	-0.1
4,224,234	-		Shewana3_3523	0.58	+0.5
4,224,265	-		Shewana3_3523	0.60	-0.0
4,224,672	-		Shewana3_3523	0.88	+0.2
4,224,732	-				-1.1
4,224,732	-				-1.3
4,224,732	-				-0.7
4,224,743	+				+0.8
4,224,751	-				+0.1
4,224,760	+				+0.8
4,224,778	-				-0.4
4,224,944	+				+0.6
4,224,971	-				-1.0
4,225,334	-		Shewana3_3525	0.36	+0.5
4,225,347	+		Shewana3_3525	0.41	-1.1
4,225,360	+		Shewana3_3525	0.47	-2.1
4,225,360	+		Shewana3_3525	0.47	-1.9
4,225,368	-		Shewana3_3525	0.50	+1.7
4,225,370	+		Shewana3_3525	0.50	-0.7
4,225,541	-				+1.1