Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3456

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,140,270	-		Shewana3_3455	0.56	+0.3
4,140,360	+		Shewana3_3455	0.61	-1.0
4,140,455	-		Shewana3_3455	0.66	+0.3
4,140,466	+		Shewana3_3455	0.66	-0.3
4,140,690	+		Shewana3_3455	0.78	-0.3
4,140,884	-		Shewana3_3455	0.87	+0.3
4,140,955	+				-0.5
4,140,955	+				-0.8
4,140,965	+				-0.6
4,140,965	+				-0.2
4,141,000	-				+0.3
4,141,092	-				+0.4
4,141,205	-				-0.2
4,141,205	-				-0.0
4,141,311	+		Shewana3_3456	0.14	+0.6
4,141,427	-		Shewana3_3456	0.24	+0.3
4,141,429	-		Shewana3_3456	0.24	+0.4
4,141,452	+		Shewana3_3456	0.26	+0.5
4,141,460	-		Shewana3_3456	0.26	+0.2
4,141,517	-		Shewana3_3456	0.31	+0.4
4,141,566	+		Shewana3_3456	0.35	+0.9
4,141,566	+		Shewana3_3456	0.35	+0.2
4,141,566	+		Shewana3_3456	0.35	+0.5
4,141,681	+		Shewana3_3456	0.44	+0.3
4,141,682	+		Shewana3_3456	0.44	+0.1
4,141,690	-		Shewana3_3456	0.45	+0.0
4,141,690	-		Shewana3_3456	0.45	-0.4
4,141,772	-		Shewana3_3456	0.52	-0.6
4,142,010	-		Shewana3_3456	0.71	+0.5
4,142,250	-				-0.6
4,142,250	-				-0.2
4,142,258	+				+0.1
4,142,295	+				-0.7
4,142,303	-				+0.2
4,142,303	-				-0.1
4,142,303	-				+0.4
4,142,319	-				-1.2
4,142,642	+				-0.2
4,142,675	+				+0.5
4,142,739	+				-0.8
4,142,761	-				-0.8
4,142,878	+		Shewana3_3457	0.19	-0.5
4,142,878	+		Shewana3_3457	0.19	-0.0
4,142,896	-		Shewana3_3457	0.21	-1.2
4,143,067	+		Shewana3_3457	0.40	+0.9
4,143,192	+		Shewana3_3457	0.53	-1.3
4,143,192	+		Shewana3_3457	0.53	-1.4
4,143,201	-		Shewana3_3457	0.54	+0.1
4,143,231	-		Shewana3_3457	0.57	-0.2
4,143,317	+		Shewana3_3457	0.67	-0.3
4,143,324	+		Shewana3_3457	0.68	-0.1
4,143,324	+		Shewana3_3457	0.68	-1.7
4,143,324	-		Shewana3_3457	0.68	+0.4
4,143,325	-		Shewana3_3457	0.68	+0.1
4,143,342	-		Shewana3_3457	0.69	-1.1