Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3439
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,121,187 | - | +1.8 | |||
4,121,245 | - | -0.5 | |||
4,121,643 | - | Shewana3_3439 | 0.45 | -1.0 | |
4,121,679 | + | Shewana3_3439 | 0.49 | +0.8 | |
4,121,687 | - | Shewana3_3439 | 0.50 | +0.2 | |
4,121,839 | + | Shewana3_3439 | 0.67 | -0.2 | |
4,122,138 | + | -0.3 | |||
4,122,212 | + | +0.7 | |||
4,122,286 | - | +1.0 | |||
4,122,319 | + | -0.1 | |||
4,122,493 | - | +1.0 | |||
4,122,496 | + | +0.1 | |||
4,122,497 | + | -0.4 | |||
4,122,704 | + | Shewana3_3440 | 0.33 | -2.6 | |
4,122,717 | - | Shewana3_3440 | 0.34 | +0.8 | |
4,122,893 | - | Shewana3_3440 | 0.56 | -2.3 | |
4,122,986 | - | Shewana3_3440 | 0.68 | +0.8 | |
4,122,986 | - | Shewana3_3440 | 0.68 | +0.5 | |
4,122,998 | - | Shewana3_3440 | 0.70 | -1.0 | |
4,123,095 | - | Shewana3_3440 | 0.82 | -0.2 |
Or see this region's nucleotide sequence