Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3340

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,007,056	+				-1.8
4,007,061	+				-0.3
4,007,069	-				+0.7
4,007,074	-				+0.4
4,007,233	-				+1.0
4,007,235	+				+0.2
4,007,265	+		Shewana3_3339	0.13	-2.3
4,007,363	-		Shewana3_3339	0.27	+0.2
4,007,363	-		Shewana3_3339	0.27	+0.0
4,007,445	-		Shewana3_3339	0.38	+0.5
4,007,477	-		Shewana3_3339	0.42	+0.3
4,007,492	+		Shewana3_3339	0.44	+0.8
4,007,660	-		Shewana3_3339	0.68	-0.8
4,007,686	-		Shewana3_3339	0.71	-1.6
4,007,786	-		Shewana3_3339	0.85	+0.5
4,007,808	-		Shewana3_3339	0.88	-1.2
4,008,076	+				-0.5
4,008,220	-				+0.8
4,008,244	-				-1.0
4,008,257	-		Shewana3_3340	0.10	-1.6
4,008,274	-		Shewana3_3340	0.11	-1.1
4,008,389	+		Shewana3_3340	0.16	-1.1
4,008,726	-		Shewana3_3340	0.31	-1.0
4,008,728	+		Shewana3_3340	0.31	-1.3
4,009,045	-		Shewana3_3340	0.46	-1.1
4,009,066	+		Shewana3_3340	0.47	-0.3
4,009,084	-		Shewana3_3340	0.47	-0.0
4,009,123	-		Shewana3_3340	0.49	-0.6
4,009,135	-		Shewana3_3340	0.50	-1.6
4,009,157	+		Shewana3_3340	0.51	-0.9
4,009,327	-		Shewana3_3340	0.58	-1.6
4,009,327	-		Shewana3_3340	0.58	-1.2
4,009,327	-		Shewana3_3340	0.58	-0.8
4,009,691	+		Shewana3_3340	0.75	-1.1
4,009,787	+		Shewana3_3340	0.79	-0.3
4,009,996	-		Shewana3_3340	0.88	-1.5
4,010,097	+				-0.5
4,010,192	-				-1.1
4,010,326	-				-0.2
4,010,361	-				-0.7
4,010,461	+		Shewana3_3341	0.16	-1.4
4,010,938	-		Shewana3_3341	0.50	-0.7
4,010,945	-		Shewana3_3341	0.50	-0.2
4,011,084	+		Shewana3_3341	0.60	-1.2
4,011,084	+		Shewana3_3341	0.60	-1.2