Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3310

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,971,466	+	rumB	Shewana3_3309	0.33	-0.6
3,971,535	+	rumB	Shewana3_3309	0.39	-1.6
3,971,857	+	rumB	Shewana3_3309	0.67	-2.0
3,971,865	-	rumB	Shewana3_3309	0.68	-0.3
3,971,865	-	rumB	Shewana3_3309	0.68	-0.1
3,971,865	-	rumB	Shewana3_3309	0.68	-0.2
3,971,875	+	rumB	Shewana3_3309	0.69	+0.1
3,971,997	+	rumB	Shewana3_3309	0.79	-0.1
3,972,017	-	rumB	Shewana3_3309	0.81	-0.1
3,972,168	-				+0.1
3,972,240	+				-0.8
3,972,240	+				-1.3
3,972,250	+				+0.3
3,972,385	-				-0.3
3,972,481	+				-2.4
3,972,481	+				-0.6
3,972,563	+		Shewana3_3310	0.12	-1.0
3,972,681	+		Shewana3_3310	0.22	-1.2
3,972,921	+		Shewana3_3310	0.42	-1.4
3,972,941	-		Shewana3_3310	0.44	-0.2
3,972,971	+		Shewana3_3310	0.47	+0.8
3,973,002	-		Shewana3_3310	0.49	+0.3
3,973,123	-		Shewana3_3310	0.59	-0.4
3,973,148	+		Shewana3_3310	0.62	-0.3
3,973,154	-		Shewana3_3310	0.62	-0.6
3,973,156	-		Shewana3_3310	0.62	-0.2
3,973,176	-		Shewana3_3310	0.64	+0.7
3,973,182	+		Shewana3_3310	0.64	-2.2
3,973,190	-		Shewana3_3310	0.65	-0.5
3,973,297	-		Shewana3_3310	0.74	+0.6
3,973,297	-		Shewana3_3310	0.74	-0.9
3,973,303	-		Shewana3_3310	0.75	+0.1
3,973,309	+		Shewana3_3310	0.75	-1.7
3,973,429	+		Shewana3_3310	0.85	-1.9
3,973,670	-				-0.1
3,973,673	+				-0.9
3,973,681	-				+0.9
3,973,703	-				+1.3
3,973,787	+		Shewana3_3311	0.23	+0.9
3,973,794	-		Shewana3_3311	0.25	+1.0
3,973,818	-		Shewana3_3311	0.30	+1.0
3,973,864	-		Shewana3_3311	0.39	+0.6
3,973,902	+		Shewana3_3311	0.46	+0.4
3,974,097	+		Shewana3_3311	0.86	-0.0
3,974,172	-				+1.3
3,974,428	+		Shewana3_3312	0.31	+0.7
3,974,478	+		Shewana3_3312	0.42	+0.9
3,974,478	+		Shewana3_3312	0.42	+0.5
3,974,604	-		Shewana3_3312	0.72	-2.3