Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3198

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,836,163	-	purT	Shewana3_3197	0.40	+0.7
3,836,178	+	purT	Shewana3_3197	0.41	-0.2
3,836,203	+	purT	Shewana3_3197	0.43	+0.3
3,836,211	-	purT	Shewana3_3197	0.44	+0.5
3,836,276	+	purT	Shewana3_3197	0.49	-1.3
3,836,284	-	purT	Shewana3_3197	0.50	-0.4
3,836,478	+	purT	Shewana3_3197	0.66	+0.8
3,836,608	+	purT	Shewana3_3197	0.78	+1.1
3,836,671	+	purT	Shewana3_3197	0.83	+0.7
3,836,739	+	purT	Shewana3_3197	0.89	+0.4
3,836,902	+				+0.9
3,836,917	-				-0.4
3,836,949	-				+1.5
3,837,092	+				-1.1
3,837,098	-				-2.6
3,837,100	-				+0.4
3,837,100	-				+0.8
3,837,212	+		Shewana3_3198	0.11	-1.5
3,837,349	+		Shewana3_3198	0.20	+0.3
3,837,649	-		Shewana3_3198	0.39	+0.3
3,837,807	-		Shewana3_3198	0.49	+0.4
3,837,871	+		Shewana3_3198	0.53	+0.1
3,837,871	+		Shewana3_3198	0.53	+1.2
3,837,889	-		Shewana3_3198	0.54	+0.1
3,837,952	-		Shewana3_3198	0.58	-0.1
3,837,980	-		Shewana3_3198	0.60	-0.0
3,837,985	-		Shewana3_3198	0.60	-1.6
3,838,040	+		Shewana3_3198	0.64	-0.3
3,838,092	-		Shewana3_3198	0.67	-1.7
3,838,116	+		Shewana3_3198	0.69	+1.1
3,838,141	-		Shewana3_3198	0.70	+1.7
3,838,146	-		Shewana3_3198	0.70	+0.3
3,838,380	-		Shewana3_3198	0.85	+0.3
3,838,448	-		Shewana3_3198	0.90	-0.7
3,838,523	-				-1.2
3,838,534	+				-0.0
3,838,540	+				+0.2
3,838,540	+				-1.2
3,838,595	-				-2.0
3,838,705	+				-1.3
3,838,705	+				+0.5
3,838,705	-				-1.4
3,838,713	-				+0.2
3,838,741	+				-0.1
3,838,797	+				+0.6
3,838,878	-		Shewana3_3199	0.12	-0.6
3,838,970	+		Shewana3_3199	0.16	-0.6
3,838,979	+		Shewana3_3199	0.16	-0.8
3,839,009	-		Shewana3_3199	0.18	-0.5
3,839,032	-		Shewana3_3199	0.19	-0.9
3,839,037	-		Shewana3_3199	0.19	-0.1
3,839,243	+		Shewana3_3199	0.28	-0.6
3,839,307	+		Shewana3_3199	0.31	-1.6
3,839,307	+		Shewana3_3199	0.31	-2.1
3,839,307	+		Shewana3_3199	0.31	+0.1
3,839,315	-		Shewana3_3199	0.31	-0.3
3,839,315	-		Shewana3_3199	0.31	-0.6
3,839,317	-		Shewana3_3199	0.31	-1.0
3,839,331	-		Shewana3_3199	0.32	+0.8
3,839,402	+		Shewana3_3199	0.35	+0.1
3,839,453	-		Shewana3_3199	0.37	-0.1
3,839,467	-		Shewana3_3199	0.38	+0.6