Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2668
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,183,752 | - | Shewana3_2667 | 0.14 | +0.2 | |
3,183,889 | + | Shewana3_2667 | 0.31 | +2.5 | |
3,184,075 | - | Shewana3_2667 | 0.56 | +0.5 | |
3,184,114 | + | Shewana3_2667 | 0.61 | +1.5 | |
3,184,225 | - | Shewana3_2667 | 0.75 | -0.5 | |
3,184,238 | + | Shewana3_2667 | 0.77 | -0.3 | |
3,184,475 | + | -0.1 | |||
3,184,475 | + | +0.6 | |||
3,184,482 | + | +1.5 | |||
3,184,482 | + | +0.5 | |||
3,184,553 | - | +0.2 | |||
3,184,599 | - | -0.8 | |||
3,184,610 | - | -0.3 | |||
3,184,728 | - | +0.2 | |||
3,184,892 | + | Shewana3_2668 | 0.33 | -2.1 | |
3,184,987 | - | Shewana3_2668 | 0.49 | -0.1 | |
3,185,037 | + | Shewana3_2668 | 0.57 | +0.5 | |
3,185,147 | + | Shewana3_2668 | 0.75 | -0.7 |
Or see this region's nucleotide sequence