Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2538
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,034,767 | - | Shewana3_2537 | 0.34 | -0.2 | |
3,035,313 | + | +1.0 | |||
3,035,970 | + | +1.0 | |||
3,036,044 | + | -0.6 | |||
3,036,103 | + | Shewana3_2539 | 0.11 | -0.8 | |
3,036,125 | - | Shewana3_2539 | 0.13 | +1.2 | |
3,036,541 | - | Shewana3_2539 | 0.61 | +1.0 | |
3,036,541 | - | Shewana3_2539 | 0.61 | +0.9 | |
3,036,613 | - | Shewana3_2539 | 0.69 | +1.4 | |
3,036,613 | - | Shewana3_2539 | 0.69 | +1.0 | |
3,036,631 | - | Shewana3_2539 | 0.71 | +1.1 | |
3,036,645 | - | Shewana3_2539 | 0.73 | +0.5 | |
3,036,805 | + | +1.6 |
Or see this region's nucleotide sequence