Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2318
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,790,117 | - | -0.5 | |||
2,790,167 | - | +1.4 | |||
2,790,465 | - | +1.0 | |||
2,790,469 | + | +0.2 | |||
2,790,504 | - | +0.4 | |||
2,790,538 | + | -0.3 | |||
2,790,834 | - | +0.1 | |||
2,790,915 | + | +1.2 | |||
2,790,967 | - | +1.2 | |||
2,790,977 | - | +1.2 | |||
2,791,006 | + | -1.2 | |||
2,791,429 | - | Shewana3_2318 | 0.39 | -0.0 | |
2,791,577 | + | Shewana3_2318 | 0.57 | -1.4 | |
2,791,814 | - | Shewana3_2318 | 0.85 | -0.6 | |
2,792,300 | - | def | Shewana3_2319 | 0.30 | +1.8 |
2,792,306 | + | def | Shewana3_2319 | 0.31 | +1.8 |
2,792,903 | - | Shewana3_2320 | 0.14 | +0.2 | |
2,792,913 | - | Shewana3_2320 | 0.17 | -0.7 |
Or see this region's nucleotide sequence