Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2308
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,773,196 | + | +1.6 | |||
2,774,167 | - | Shewana3_2308 | 0.39 | +0.8 | |
2,774,394 | + | Shewana3_2308 | 0.49 | +1.8 | |
2,774,403 | - | Shewana3_2308 | 0.50 | -0.2 | |
2,774,529 | - | Shewana3_2308 | 0.55 | -0.0 | |
2,774,670 | + | Shewana3_2308 | 0.62 | +1.8 | |
2,774,860 | + | Shewana3_2308 | 0.70 | +0.5 | |
2,775,119 | + | Shewana3_2308 | 0.81 | +0.5 | |
2,775,127 | - | Shewana3_2308 | 0.82 | -0.2 | |
2,775,445 | - | +2.8 | |||
2,775,936 | - | Shewana3_2309 | 0.20 | +2.2 | |
2,776,192 | - | Shewana3_2309 | 0.41 | -0.0 | |
2,776,307 | + | Shewana3_2309 | 0.51 | +1.8 | |
2,776,467 | - | Shewana3_2309 | 0.64 | +0.7 | |
2,776,477 | - | Shewana3_2309 | 0.65 | -0.3 |
Or see this region's nucleotide sequence