Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2248
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,708,929 | + | Shewana3_2247 | 0.56 | +0.8 | |
2,709,987 | + | Shewana3_2248 | 0.16 | +0.8 | |
2,709,995 | - | Shewana3_2248 | 0.18 | -0.0 | |
2,710,137 | + | Shewana3_2248 | 0.54 | -0.8 | |
2,710,348 | + | -0.4 | |||
2,710,348 | + | -0.4 | |||
2,710,348 | + | +0.2 | |||
2,710,356 | - | -1.8 | |||
2,710,356 | - | +0.5 | |||
2,710,356 | - | -0.1 | |||
2,710,518 | + | Shewana3_2249 | 0.18 | +0.5 | |
2,710,582 | + | Shewana3_2249 | 0.28 | +1.2 | |
2,710,777 | - | Shewana3_2249 | 0.57 | -1.1 | |
2,710,837 | + | Shewana3_2249 | 0.67 | +0.5 | |
2,710,863 | + | Shewana3_2249 | 0.71 | +0.2 | |
2,711,063 | + | +1.8 | |||
2,711,063 | + | +0.5 | |||
2,711,063 | + | +0.2 | |||
2,711,063 | + | +0.5 | |||
2,711,200 | + | -0.5 |
Or see this region's nucleotide sequence