Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2104
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,526,649 | - | +1.9 | |||
2,526,991 | - | +0.6 | |||
2,527,176 | - | +0.9 | |||
2,527,176 | - | +2.9 | |||
2,527,273 | - | +2.9 | |||
2,527,284 | - | -0.8 | |||
2,527,571 | - | Shewana3_2104 | 0.10 | +2.9 | |
2,527,948 | - | Shewana3_2104 | 0.39 | -0.1 | |
2,528,119 | + | Shewana3_2104 | 0.52 | -0.3 | |
2,528,175 | + | Shewana3_2104 | 0.57 | +2.9 | |
2,528,182 | - | Shewana3_2104 | 0.57 | -0.1 | |
2,528,526 | - | Shewana3_2104 | 0.84 | -1.3 | |
2,528,902 | - | +1.2 | |||
2,528,969 | - | +0.5 | |||
2,529,309 | + | -0.5 | |||
2,529,382 | - | Shewana3_2105 | 0.12 | +0.3 | |
2,529,384 | + | Shewana3_2105 | 0.12 | -1.3 | |
2,529,418 | + | Shewana3_2105 | 0.15 | +1.3 | |
2,529,471 | + | Shewana3_2105 | 0.18 | +1.3 | |
2,529,546 | - | Shewana3_2105 | 0.23 | +0.3 | |
2,529,732 | - | Shewana3_2105 | 0.35 | -0.1 |
Or see this region's nucleotide sequence