Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2092
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,510,426 | + | Shewana3_2090 | 0.69 | +0.2 | |
2,510,569 | + | Shewana3_2090 | 0.85 | -1.1 | |
2,510,820 | - | Shewana3_2091 | 0.19 | +1.3 | |
2,510,984 | - | Shewana3_2091 | 0.46 | -0.4 | |
2,511,078 | + | Shewana3_2091 | 0.61 | +1.0 | |
2,511,115 | - | Shewana3_2091 | 0.67 | +1.9 | |
2,511,154 | + | Shewana3_2091 | 0.73 | +0.8 | |
2,511,209 | - | Shewana3_2091 | 0.82 | +0.3 | |
2,511,269 | + | +0.1 | |||
2,511,604 | - | Shewana3_2092 | 0.31 | -0.1 | |
2,511,671 | + | Shewana3_2092 | 0.38 | +0.8 | |
2,511,681 | + | Shewana3_2092 | 0.39 | -1.0 | |
2,511,691 | + | Shewana3_2092 | 0.41 | +0.5 | |
2,511,763 | + | Shewana3_2092 | 0.49 | +0.4 | |
2,511,864 | - | Shewana3_2092 | 0.60 | +1.3 | |
2,511,872 | + | Shewana3_2092 | 0.61 | +1.5 | |
2,511,911 | - | Shewana3_2092 | 0.65 | -1.2 | |
2,511,931 | - | Shewana3_2092 | 0.67 | +0.9 | |
2,512,033 | + | Shewana3_2092 | 0.79 | -0.5 | |
2,512,758 | + | +0.1 | |||
2,512,779 | - | +1.9 | |||
2,512,930 | + | +1.9 | |||
2,513,140 | + | -0.1 | |||
2,513,143 | - | +0.1 | |||
2,513,143 | - | +1.9 | |||
2,513,143 | - | +1.4 |
Or see this region's nucleotide sequence