Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2082
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,492,476 | - | Shewana3_2081 | 0.49 | -0.4 | |
2,492,572 | + | Shewana3_2081 | 0.55 | +1.3 | |
2,492,929 | + | Shewana3_2081 | 0.80 | +1.3 | |
2,493,767 | - | Shewana3_2082 | 0.32 | +0.9 | |
2,493,973 | + | Shewana3_2082 | 0.51 | -3.4 | |
2,493,974 | + | Shewana3_2082 | 0.51 | -0.4 | |
2,494,192 | + | Shewana3_2082 | 0.71 | +0.6 | |
2,494,265 | - | Shewana3_2082 | 0.78 | +0.9 | |
2,494,432 | - | +2.9 | |||
2,494,436 | + | -0.1 | |||
2,494,436 | + | +2.3 | |||
2,494,436 | + | -0.1 | |||
2,494,451 | + | +0.8 | |||
2,494,577 | + | -0.4 | |||
2,494,585 | - | +2.9 | |||
2,494,585 | - | +0.9 | |||
2,495,041 | - | Shewana3_2083 | 0.29 | -0.2 | |
2,495,099 | + | Shewana3_2083 | 0.32 | +0.8 | |
2,495,119 | + | Shewana3_2083 | 0.33 | -1.6 | |
2,495,126 | + | Shewana3_2083 | 0.33 | +0.1 | |
2,495,357 | - | Shewana3_2083 | 0.45 | +1.9 |
Or see this region's nucleotide sequence