Strain Fitness in Shewanella sp. ANA-3 around Shewana3_2072

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,479,136	-				+0.6
2,479,445	-		Shewana3_2071	0.22	+2.9
2,479,453	+		Shewana3_2071	0.23	+1.9
2,479,457	-		Shewana3_2071	0.24	+2.9
2,479,533	-		Shewana3_2071	0.34	+2.9
2,479,622	-		Shewana3_2071	0.45	+1.9
2,479,781	+		Shewana3_2071	0.66	-1.1
2,479,782	-		Shewana3_2071	0.66	+1.9
2,479,793	+		Shewana3_2071	0.67	+0.3
2,479,793	+		Shewana3_2071	0.67	-0.9
2,479,794	-		Shewana3_2071	0.67	+1.3
2,479,865	-		Shewana3_2071	0.77	+1.3
2,479,877	+		Shewana3_2071	0.78	+0.0
2,479,892	+		Shewana3_2071	0.80	+0.9
2,479,910	-		Shewana3_2071	0.82	+0.9
2,479,999	+				+0.9
2,479,999	+				+1.3
2,479,999	+				+0.7
2,479,999	+				+1.3
2,479,999	+				+1.0
2,479,999	+				-0.1
2,479,999	+				-0.8
2,479,999	+				-1.2
2,479,999	+				+1.9
2,480,007	-				+1.3
2,480,085	+				+1.3
2,480,116	-				+1.9
2,480,118	-				+1.9
2,480,122	+				+2.9
2,480,129	+				+2.9
2,480,129	+				+0.6
2,480,130	-				-0.8
2,480,137	-				+0.9
2,480,177	+				+2.9
2,480,180	+				+1.9
2,480,183	-				+0.6
2,480,209	+				-0.4
2,480,209	+				+0.9
2,480,209	+				+0.6
2,480,209	+				+1.9
2,480,209	+				+0.9
2,480,209	+				+1.3
2,480,209	+				+2.9
2,480,209	+				+0.9
2,480,217	-				+0.6
2,480,217	-				+1.3
2,480,217	-				+0.9
2,480,217	-				-0.4
2,480,217	-				+1.3
2,480,217	-				-0.4
2,480,217	-				-0.3
2,480,217	-				+1.3
2,480,217	-				+0.6
2,480,217	-				+0.0
2,480,242	+		Shewana3_2072	0.11	+1.9
2,480,242	+		Shewana3_2072	0.11	-0.3
2,480,242	+		Shewana3_2072	0.11	+1.9
2,480,250	-		Shewana3_2072	0.12	+1.9
2,480,250	-		Shewana3_2072	0.12	+0.6
2,480,250	-		Shewana3_2072	0.12	-0.7
2,480,250	-		Shewana3_2072	0.12	-0.1
2,480,250	-		Shewana3_2072	0.12	-1.5
2,480,250	-		Shewana3_2072	0.12	-0.3
2,480,261	-		Shewana3_2072	0.13	+0.3
2,480,292	+		Shewana3_2072	0.16	+0.9
2,480,307	-		Shewana3_2072	0.17	+0.3
2,480,338	+		Shewana3_2072	0.20	-0.3
2,480,390	-		Shewana3_2072	0.25	+0.9
2,480,390	-		Shewana3_2072	0.25	+1.3
2,480,390	-		Shewana3_2072	0.25	-0.3
2,480,390	-		Shewana3_2072	0.25	+0.1
2,480,460	+		Shewana3_2072	0.32	+0.9
2,480,461	+		Shewana3_2072	0.32	+1.9
2,480,461	+		Shewana3_2072	0.32	+2.9
2,480,468	-		Shewana3_2072	0.33	+1.2
2,480,468	-		Shewana3_2072	0.33	+0.6
2,480,468	-		Shewana3_2072	0.33	+0.9
2,480,468	-		Shewana3_2072	0.33	+2.9
2,480,469	-		Shewana3_2072	0.33	+1.9
2,480,469	-		Shewana3_2072	0.33	+0.9
2,480,469	-		Shewana3_2072	0.33	-1.2
2,480,469	-		Shewana3_2072	0.33	+1.3
2,480,491	-		Shewana3_2072	0.35	+0.9
2,480,491	-		Shewana3_2072	0.35	-0.1
2,480,491	-		Shewana3_2072	0.35	-2.0
2,480,682	-		Shewana3_2072	0.53	+1.3
2,480,721	+		Shewana3_2072	0.57	+1.9
2,480,721	+		Shewana3_2072	0.57	+0.6
2,480,727	+		Shewana3_2072	0.57	+0.6
2,480,727	+		Shewana3_2072	0.57	-0.3
2,480,729	-		Shewana3_2072	0.57	+1.9
2,480,730	-		Shewana3_2072	0.57	+0.1
2,480,730	-		Shewana3_2072	0.57	+0.9
2,480,736	+		Shewana3_2072	0.58	+0.6
2,480,755	+		Shewana3_2072	0.60	+2.9
2,480,755	+		Shewana3_2072	0.60	+2.9
2,480,755	+		Shewana3_2072	0.60	-0.1
2,480,755	+		Shewana3_2072	0.60	+0.2
2,480,755	+		Shewana3_2072	0.60	+1.6
2,480,763	-		Shewana3_2072	0.61	+1.3
2,480,763	-		Shewana3_2072	0.61	+1.3
2,480,763	-		Shewana3_2072	0.61	+1.3
2,480,763	-		Shewana3_2072	0.61	+1.3
2,480,765	+		Shewana3_2072	0.61	-0.1
2,480,773	-		Shewana3_2072	0.61	+0.1
2,480,778	+		Shewana3_2072	0.62	-0.3
2,480,794	+				+2.9
2,480,799	+		Shewana3_2072	0.64	+1.3
2,480,809	+		Shewana3_2072	0.65	+1.9
2,480,915	+		Shewana3_2072	0.75	+0.9
2,480,987	+		Shewana3_2072	0.82	+0.5
2,481,032	+		Shewana3_2072	0.86	-0.3
2,481,032	+		Shewana3_2072	0.86	-0.3
2,481,032	+		Shewana3_2072	0.86	-0.5
2,481,033	+		Shewana3_2072	0.86	+0.2
2,481,033	+		Shewana3_2072	0.86	-1.7
2,481,033	+		Shewana3_2072	0.86	-0.7
2,481,033	+		Shewana3_2072	0.86	+0.9
2,481,040	+		Shewana3_2072	0.87	+0.5
2,481,041	-		Shewana3_2072	0.87	+0.3
2,481,041	-		Shewana3_2072	0.87	+1.3
2,481,048	-		Shewana3_2072	0.88	+1.9
2,481,057	+		Shewana3_2072	0.88	-0.1
2,481,097	+				+0.9
2,481,097	+				+0.6
2,481,105	-				+2.9
2,481,105	-				+1.3
2,481,115	+				-1.2
2,481,222	+				+0.1
2,481,225	+				+0.0
2,481,225	+				+0.9
2,481,226	-				+1.9
2,481,233	-				-0.1
2,481,233	-				+2.9
2,481,235	+				+0.6
2,481,235	+				+0.1
2,481,235	+				-1.1
2,481,235	+				-0.5
2,481,235	+				+0.3
2,481,235	+				-1.0
2,481,235	+				-0.7
2,481,235	+				-0.1
2,481,243	-				+1.3
2,481,243	-				+2.9
2,481,324	+				+1.3
2,481,425	-		Shewana3_2073	0.16	+1.3
2,481,478	+		Shewana3_2073	0.21	+1.9
2,481,686	+		Shewana3_2073	0.43	-0.8
2,481,709	-		Shewana3_2073	0.46	+2.9
2,481,856	+		Shewana3_2073	0.61	-2.3
2,481,864	-		Shewana3_2073	0.62	+1.3
2,481,887	+		Shewana3_2073	0.65	+0.6
2,482,174	-				+2.9