Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1937
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,303,085 | + | Shewana3_1936 | 0.57 | -1.1 | |
2,303,178 | + | Shewana3_1936 | 0.62 | -0.9 | |
2,303,209 | + | Shewana3_1936 | 0.63 | +0.1 | |
2,303,685 | + | Shewana3_1936 | 0.85 | +1.4 | |
2,303,689 | - | Shewana3_1936 | 0.85 | -0.9 | |
2,303,971 | - | +0.6 | |||
2,303,971 | - | +0.9 | |||
2,303,987 | + | -0.2 | |||
2,304,105 | - | -0.9 | |||
2,304,237 | - | Shewana3_1937 | 0.13 | -0.3 | |
2,304,237 | - | Shewana3_1937 | 0.13 | +0.4 | |
2,304,841 | + | Shewana3_1937 | 0.49 | -0.3 | |
2,304,886 | - | Shewana3_1937 | 0.52 | +2.9 | |
2,304,954 | + | Shewana3_1937 | 0.56 | -0.6 | |
2,304,962 | - | Shewana3_1937 | 0.57 | +0.0 | |
2,305,170 | - | Shewana3_1937 | 0.69 | +0.6 | |
2,305,175 | - | Shewana3_1937 | 0.69 | +0.1 | |
2,305,347 | - | Shewana3_1937 | 0.79 | +0.6 | |
2,305,512 | + | Shewana3_1937 | 0.89 | -0.6 | |
2,305,522 | + | Shewana3_1937 | 0.90 | -0.9 | |
2,305,633 | + | +0.4 | |||
2,305,794 | + | Shewana3_1938 | 0.10 | +0.9 | |
2,305,888 | - | Shewana3_1938 | 0.19 | -0.1 | |
2,305,960 | - | Shewana3_1938 | 0.27 | +1.5 | |
2,306,164 | - | Shewana3_1938 | 0.47 | +1.9 | |
2,306,166 | + | Shewana3_1938 | 0.47 | +1.4 | |
2,306,350 | - | Shewana3_1938 | 0.65 | +0.6 | |
2,306,457 | - | Shewana3_1938 | 0.75 | +0.6 |
Or see this region's nucleotide sequence