Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1909
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,265,299 | - | Shewana3_1908 | 0.56 | +2.3 | |
2,265,587 | - | Shewana3_1908 | 0.80 | +1.5 | |
2,265,973 | + | +0.8 | |||
2,265,995 | + | -0.9 | |||
2,266,025 | - | -0.1 | |||
2,266,057 | + | -1.3 | |||
2,266,060 | - | -0.9 | |||
2,266,083 | - | +1.6 | |||
2,266,090 | + | +0.3 | |||
2,266,586 | + | Shewana3_1909 | 0.53 | +1.9 | |
2,266,641 | + | Shewana3_1909 | 0.62 | -0.4 | |
2,266,999 | - | +1.6 | |||
2,266,999 | - | +2.2 | |||
2,267,192 | + | Shewana3_1910 | 0.20 | +1.3 | |
2,267,197 | + | Shewana3_1910 | 0.21 | -0.7 | |
2,267,200 | - | Shewana3_1910 | 0.21 | +0.2 | |
2,267,461 | + | Shewana3_1910 | 0.53 | +0.3 | |
2,267,463 | + | Shewana3_1910 | 0.53 | +1.9 | |
2,267,604 | - | Shewana3_1910 | 0.70 | -0.5 | |
2,267,621 | + | Shewana3_1910 | 0.72 | -0.3 | |
2,267,632 | - | Shewana3_1910 | 0.73 | +0.6 | |
2,267,651 | - | Shewana3_1910 | 0.76 | +0.4 |
Or see this region's nucleotide sequence