Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1818

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,143,469	-		Shewana3_1816	0.68	-0.5
2,143,773	+				-0.5
2,143,780	-		Shewana3_1817	0.11	+1.8
2,143,874	+		Shewana3_1817	0.29	+0.8
2,143,874	+		Shewana3_1817	0.29	+0.6
2,143,874	+		Shewana3_1817	0.29	-0.8
2,143,887	-		Shewana3_1817	0.31	+0.5
2,143,974	-		Shewana3_1817	0.47	+2.8
2,144,116	+		Shewana3_1817	0.73	+0.4
2,144,126	+		Shewana3_1817	0.75	-0.8
2,144,360	+				-0.6
2,144,368	-				+0.2
2,144,368	-				+2.8
2,144,386	+				-0.5
2,144,386	+				+1.2
2,144,386	+				+0.7
2,144,386	+				-1.1
2,144,430	+				+0.6
2,144,490	+				-0.3
2,144,822	+		Shewana3_1818	0.16	+1.4
2,144,828	+		Shewana3_1818	0.16	-1.8
2,144,841	-		Shewana3_1818	0.16	+0.2
2,144,915	+		Shewana3_1818	0.18	+0.4
2,145,128	+		Shewana3_1818	0.24	+0.1
2,145,136	-		Shewana3_1818	0.25	+0.1
2,145,136	-		Shewana3_1818	0.25	+1.8
2,145,461	+		Shewana3_1818	0.34	+0.2
2,145,590	-		Shewana3_1818	0.38	+1.8
2,145,590	-		Shewana3_1818	0.38	+2.8
2,145,590	-		Shewana3_1818	0.38	+0.8
2,145,721	+		Shewana3_1818	0.42	+1.6
2,145,935	+		Shewana3_1818	0.48	+1.2
2,145,978	-		Shewana3_1818	0.49	+1.8
2,146,083	-		Shewana3_1818	0.52	-0.5
2,146,312	+		Shewana3_1818	0.59	-0.3
2,146,312	+		Shewana3_1818	0.59	-0.3
2,146,464	-		Shewana3_1818	0.63	+0.5
2,146,569	+		Shewana3_1818	0.66	-2.7
2,146,569	+		Shewana3_1818	0.66	-0.9
2,146,569	+		Shewana3_1818	0.66	+1.4
2,146,569	+		Shewana3_1818	0.66	+0.6
2,146,569	+		Shewana3_1818	0.66	-0.1
2,146,569	-		Shewana3_1818	0.66	+1.8
2,146,577	-		Shewana3_1818	0.66	-0.8
2,146,577	-		Shewana3_1818	0.66	+0.8
2,146,577	-		Shewana3_1818	0.66	+2.8
2,146,890	-		Shewana3_1818	0.75	+1.2
2,146,951	+		Shewana3_1818	0.77	+1.0
2,146,951	+		Shewana3_1818	0.77	+0.6
2,147,642	+				-0.3
2,147,852	+				-0.2
2,147,892	+				-0.9
2,147,936	+				+0.5
2,147,937	-				+0.6
2,147,970	-				+0.2
2,148,036	+				-1.0
2,148,203	-				+0.4
2,148,212	+				-0.0
2,148,333	-		Shewana3_1819	0.13	-2.8
2,148,371	+		Shewana3_1819	0.14	+1.2
2,148,414	-		Shewana3_1819	0.15	-0.2
2,148,562	-		Shewana3_1819	0.20	+0.0
2,148,606	+		Shewana3_1819	0.21	-0.3