Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1702

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,998,858	-				+0.4
1,998,865	+				+1.1
1,998,871	-				+1.4
1,998,981	+		Shewana3_1700	0.58	-1.3
1,998,981	+		Shewana3_1700	0.58	+1.1
1,999,037	+		Shewana3_1700	0.84	+0.4
1,999,553	-		Shewana3_1701	0.64	-1.4
1,999,606	-		Shewana3_1701	0.80	+0.4
1,999,847	-				-0.1
1,999,880	-				+0.7
1,999,910	+				+3.7
1,999,916	-				+0.7
1,999,918	-				+0.7
1,999,962	-				-0.4
2,000,078	+				+1.7
2,000,167	-		Shewana3_1702	0.11	+1.2
2,000,247	+		Shewana3_1702	0.14	+1.1
2,000,497	+		Shewana3_1702	0.22	+1.1
2,000,897	+		Shewana3_1702	0.35	-2.3
2,000,926	+		Shewana3_1702	0.36	-1.3
2,000,926	+		Shewana3_1702	0.36	-0.8
2,000,926	+		Shewana3_1702	0.36	-0.5
2,000,934	-		Shewana3_1702	0.36	-0.5
2,001,121	-		Shewana3_1702	0.42	-0.4
2,001,186	-		Shewana3_1702	0.44	-1.6
2,001,193	+		Shewana3_1702	0.45	+0.1
2,001,265	-		Shewana3_1702	0.47	+0.4
2,001,344	-		Shewana3_1702	0.49	-0.3
2,001,348	+		Shewana3_1702	0.50	+0.7
2,001,611	+		Shewana3_1702	0.58	-1.0
2,001,792	-		Shewana3_1702	0.64	+0.4
2,002,076	-		Shewana3_1702	0.73	-0.3
2,002,167	+		Shewana3_1702	0.76	-1.9
2,002,260	-		Shewana3_1702	0.79	-0.4
2,002,389	+		Shewana3_1702	0.84	-2.6
2,002,391	-		Shewana3_1702	0.84	-1.3
2,002,426	+		Shewana3_1702	0.85	-1.0
2,002,630	+				+0.1
2,002,638	-				+0.7
2,002,926	+				+0.1
2,002,971	-				-0.6
2,002,972	-				-0.6
2,002,972	-				-0.1
2,002,972	-				-0.1
2,003,062	+				+0.3
2,003,142	-				-1.4
2,003,338	+		Shewana3_1703	0.14	-2.4
2,003,407	+		Shewana3_1703	0.16	+1.7
2,003,547	+		Shewana3_1703	0.20	-0.3
2,003,563	+		Shewana3_1703	0.21	-0.1
2,003,660	-		Shewana3_1703	0.24	+0.4
2,003,827	-				+3.7