Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1618

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,902,717	+		Shewana3_1617	0.21	+0.9
1,902,719	+		Shewana3_1617	0.21	-0.7
1,902,719	+		Shewana3_1617	0.21	-1.4
1,902,719	+		Shewana3_1617	0.21	+0.1
1,902,719	+		Shewana3_1617	0.21	-1.2
1,902,727	-		Shewana3_1617	0.22	+1.5
1,902,727	-		Shewana3_1617	0.22	+2.5
1,902,729	+		Shewana3_1617	0.22	+0.2
1,902,729	+		Shewana3_1617	0.22	+0.9
1,902,737	+		Shewana3_1617	0.23	+1.3
1,902,737	+		Shewana3_1617	0.23	-0.5
1,902,737	+		Shewana3_1617	0.23	+0.9
1,902,737	-		Shewana3_1617	0.23	-0.2
1,902,737	-		Shewana3_1617	0.23	+0.5
1,902,737	-		Shewana3_1617	0.23	+0.5
1,902,775	+		Shewana3_1617	0.28	+2.5
1,902,775	+		Shewana3_1617	0.28	+2.5
1,902,775	+		Shewana3_1617	0.28	+0.2
1,902,783	-		Shewana3_1617	0.28	+0.9
1,902,783	-		Shewana3_1617	0.28	-0.5
1,902,790	-		Shewana3_1617	0.29	+2.5
1,902,806	-		Shewana3_1617	0.31	+1.5
1,902,820	+		Shewana3_1617	0.33	-0.5
1,902,854	+		Shewana3_1617	0.37	+1.5
1,902,872	+		Shewana3_1617	0.39	-0.1
1,902,872	+		Shewana3_1617	0.39	+2.1
1,902,872	+		Shewana3_1617	0.39	-0.9
1,902,872	+		Shewana3_1617	0.39	+1.3
1,902,872	+		Shewana3_1617	0.39	+1.5
1,902,872	+		Shewana3_1617	0.39	-0.9
1,902,872	+		Shewana3_1617	0.39	+0.5
1,902,872	+		Shewana3_1617	0.39	+1.5
1,902,872	+		Shewana3_1617	0.39	-1.2
1,902,872	+		Shewana3_1617	0.39	+0.9
1,902,872	+		Shewana3_1617	0.39	-0.6
1,902,880	-		Shewana3_1617	0.40	-0.3
1,902,880	-		Shewana3_1617	0.40	+0.5
1,902,880	-		Shewana3_1617	0.40	+1.5
1,902,880	-		Shewana3_1617	0.40	-0.7
1,902,880	-		Shewana3_1617	0.40	-0.4
1,902,880	-		Shewana3_1617	0.40	+2.5
1,902,880	-		Shewana3_1617	0.40	-0.1
1,902,880	-		Shewana3_1617	0.40	-1.1
1,902,880	-		Shewana3_1617	0.40	-0.3
1,902,880	-		Shewana3_1617	0.40	+0.2
1,902,880	-		Shewana3_1617	0.40	-1.2
1,902,880	-		Shewana3_1617	0.40	-0.5
1,902,880	-		Shewana3_1617	0.40	+1.8
1,902,882	+		Shewana3_1617	0.40	+0.5
1,902,882	+		Shewana3_1617	0.40	+0.2
1,902,882	+		Shewana3_1617	0.40	+1.5
1,902,882	+		Shewana3_1617	0.40	+1.9
1,902,882	+		Shewana3_1617	0.40	-0.9
1,902,882	+		Shewana3_1617	0.40	-0.7
1,902,882	+		Shewana3_1617	0.40	-0.3
1,902,882	+		Shewana3_1617	0.40	+2.5
1,902,883	-		Shewana3_1617	0.40	-1.2
1,902,885	-		Shewana3_1617	0.41	+0.7
1,902,885	-		Shewana3_1617	0.41	-0.9
1,902,887	+		Shewana3_1617	0.41	-0.3
1,902,887	+		Shewana3_1617	0.41	-1.4
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+0.5
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	-2.0
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+0.5
1,902,887	+		Shewana3_1617	0.41	-1.3
1,902,887	+		Shewana3_1617	0.41	-0.5
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+1.5
1,902,887	+		Shewana3_1617	0.41	+0.9
1,902,887	+		Shewana3_1617	0.41	+2.5
1,902,889	+		Shewana3_1617	0.41	+0.1
1,902,889	+		Shewana3_1617	0.41	-0.8
1,902,889	+		Shewana3_1617	0.41	+1.5
1,902,889	+		Shewana3_1617	0.41	+0.5
1,902,889	+		Shewana3_1617	0.41	-1.5
1,902,889	+		Shewana3_1617	0.41	+0.9
1,902,889	+		Shewana3_1617	0.41	+0.9
1,902,890	-		Shewana3_1617	0.41	-0.1
1,902,890	-		Shewana3_1617	0.41	+1.5
1,902,890	-		Shewana3_1617	0.41	+0.9
1,902,890	-		Shewana3_1617	0.41	+0.5
1,902,895	-		Shewana3_1617	0.42	+2.5
1,902,895	-		Shewana3_1617	0.42	+0.2
1,902,895	-		Shewana3_1617	0.42	+1.5
1,902,895	-		Shewana3_1617	0.42	-0.1
1,902,895	-		Shewana3_1617	0.42	+0.5
1,902,895	-		Shewana3_1617	0.42	-0.1
1,902,895	-		Shewana3_1617	0.42	-0.6
1,902,895	-		Shewana3_1617	0.42	-0.7
1,902,895	-		Shewana3_1617	0.42	-1.8
1,902,895	-		Shewana3_1617	0.42	-1.9
1,902,895	-		Shewana3_1617	0.42	-0.3
1,902,895	-		Shewana3_1617	0.42	-0.1
1,902,895	-		Shewana3_1617	0.42	+0.5
1,902,895	-		Shewana3_1617	0.42	+2.5
1,902,897	-		Shewana3_1617	0.42	-0.8
1,902,897	-		Shewana3_1617	0.42	+0.5
1,902,897	-		Shewana3_1617	0.42	-1.5
1,902,897	-		Shewana3_1617	0.42	-1.7
1,902,897	-		Shewana3_1617	0.42	-1.1
1,902,897	-		Shewana3_1617	0.42	+0.9
1,902,897	-		Shewana3_1617	0.42	-1.2
1,902,926	-		Shewana3_1617	0.45	-1.4
1,902,932	-		Shewana3_1617	0.46	-1.5
1,903,022	+		Shewana3_1617	0.57	-1.7
1,903,022	+		Shewana3_1617	0.57	+2.5
1,903,030	-		Shewana3_1617	0.58	-0.9
1,903,039	+		Shewana3_1617	0.59	+0.4
1,903,047	-		Shewana3_1617	0.60	-1.5
1,903,049	+		Shewana3_1617	0.60	+1.5
1,903,049	+		Shewana3_1617	0.60	+0.2
1,903,049	+		Shewana3_1617	0.60	+0.9
1,903,057	-		Shewana3_1617	0.61	-0.1
1,903,057	-		Shewana3_1617	0.61	-0.1
1,903,057	-		Shewana3_1617	0.61	-0.7
1,903,057	-		Shewana3_1617	0.61	+2.5
1,903,057	-		Shewana3_1617	0.61	-1.0
1,903,057	-		Shewana3_1617	0.61	-1.4
1,903,083	-		Shewana3_1617	0.64	+1.5
1,903,101	+		Shewana3_1617	0.66	-1.1
1,903,188	-		Shewana3_1617	0.77	-0.5
1,903,239	+		Shewana3_1617	0.83	-0.1
1,903,250	+		Shewana3_1617	0.84	-0.6
1,903,313	+				-2.1
1,903,321	-				+0.5
1,903,321	-				+1.5
1,903,336	+				+0.1
1,903,336	+				+0.2
1,903,336	+				-3.1
1,903,336	+				-1.3
1,903,336	+				-0.9
1,903,336	+				-1.7
1,903,336	+				-0.9
1,903,336	+				-0.7
1,903,336	+				+0.1
1,903,336	+				-0.7
1,903,341	+				-0.1
1,903,344	-				+0.2
1,903,344	-				+0.5
1,903,344	-				-1.4
1,903,354	-				-1.1
1,903,378	-				+2.5
1,903,387	+				+0.9
1,903,395	-				+0.5
1,903,432	-				-0.2
1,903,432	-				-0.8
1,903,496	-				-1.3
1,903,501	-				-0.0
1,903,679	-				+2.6
1,903,778	-		Shewana3_1618	0.10	+2.6
1,903,804	+		Shewana3_1618	0.14	-0.6
1,903,907	+		Shewana3_1618	0.31	-0.8
1,903,909	-		Shewana3_1618	0.31	+0.2
1,903,937	+		Shewana3_1618	0.35	-0.9
1,903,945	-		Shewana3_1618	0.37	+1.6
1,903,963	+		Shewana3_1618	0.39	+0.2
1,903,971	-		Shewana3_1618	0.41	-2.1
1,903,999	+		Shewana3_1618	0.45	+0.3
1,904,007	-		Shewana3_1618	0.46	-2.0
1,904,325	+				+0.2
1,904,547	-				+0.2
1,904,547	-				-2.2
1,904,608	+				+0.2
1,904,611	-				+2.6
1,904,616	-				+1.0
1,904,616	-				+2.6
1,904,743	+		Shewana3_1619	0.13	+1.1
1,904,751	-		Shewana3_1619	0.14	+1.0
1,904,926	-		Shewana3_1619	0.20	+0.2
1,905,050	-		Shewana3_1619	0.24	-0.1
1,905,057	+		Shewana3_1619	0.25	+0.7
1,905,220	-		Shewana3_1619	0.30	+0.5
1,905,234	+		Shewana3_1619	0.31	+1.5
1,905,250	-		Shewana3_1619	0.31	+0.9
1,905,300	-		Shewana3_1619	0.33	+2.5