Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1559

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,820,054	-				+0.9
1,820,057	+				+0.2
1,820,107	+				-1.9
1,820,112	+				+1.6
1,820,112	+				-1.4
1,820,114	-				-1.4
1,820,120	-				+0.7
1,820,135	-				-2.5
1,820,147	-				-1.4
1,820,179	-				+0.3
1,820,345	+				+0.3
1,820,345	-				+0.4
1,820,683	+				+1.9
1,820,918	+				-0.1
1,821,059	+		Shewana3_1559	0.18	-0.9
1,821,059	+		Shewana3_1559	0.18	+1.2
1,821,059	+		Shewana3_1559	0.18	+1.3
1,821,059	+		Shewana3_1559	0.18	-0.6
1,821,059	+		Shewana3_1559	0.18	+0.4
1,821,067	-		Shewana3_1559	0.18	+1.7
1,821,067	-		Shewana3_1559	0.18	+0.6
1,821,167	+		Shewana3_1559	0.29	+0.4
1,821,169	+		Shewana3_1559	0.29	+0.4
1,821,187	+		Shewana3_1559	0.31	-1.3
1,821,217	-		Shewana3_1559	0.34	-1.5
1,821,228	+		Shewana3_1559	0.35	+2.1
1,821,228	+		Shewana3_1559	0.35	+0.5
1,821,236	-		Shewana3_1559	0.36	+0.4
1,821,236	-		Shewana3_1559	0.36	+1.0
1,821,303	+		Shewana3_1559	0.42	-0.9
1,821,333	-		Shewana3_1559	0.45	-1.4
1,821,443	-		Shewana3_1559	0.56	-1.3
1,821,552	+		Shewana3_1559	0.67	+0.7
1,821,552	+		Shewana3_1559	0.67	+0.2
1,821,634	+		Shewana3_1559	0.76	-0.8
1,821,669	-		Shewana3_1559	0.79	+1.6
1,821,712	+		Shewana3_1559	0.84	-0.6
1,821,718	+		Shewana3_1559	0.84	+1.1
1,821,824	-				+0.3
1,821,834	-				-0.9
1,821,890	-				-2.4
1,821,936	-				-0.4
1,821,936	-				-0.5
1,822,097	+				+0.5
1,822,143	+		Shewana3_1560	0.14	-0.6
1,822,151	-		Shewana3_1560	0.14	+1.6
1,822,185	+		Shewana3_1560	0.18	-0.4
1,822,185	+		Shewana3_1560	0.18	-2.3
1,822,358	-		Shewana3_1560	0.34	+0.2
1,822,377	-		Shewana3_1560	0.35	+2.6
1,822,450	+		Shewana3_1560	0.42	-0.6
1,822,477	+		Shewana3_1560	0.45	-0.0
1,822,614	-		Shewana3_1560	0.58	+0.6
1,822,682	-		Shewana3_1560	0.64	+0.4
1,822,716	-		Shewana3_1560	0.67	+0.6
1,822,816	+		Shewana3_1560	0.76	-0.7
1,822,816	+		Shewana3_1560	0.76	+0.6
1,822,824	-		Shewana3_1560	0.77	+0.8
1,822,824	-		Shewana3_1560	0.77	+0.6
1,822,824	-		Shewana3_1560	0.77	-1.0
1,822,839	+		Shewana3_1560	0.78	-0.1
1,822,844	+		Shewana3_1560	0.79	+0.8