Strain Fitness in Shewanella sp. ANA-3 around Shewana3_1043

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,219,599	-	deoA	Shewana3_1042	0.49	-1.7
1,219,661	-	deoA	Shewana3_1042	0.54	-1.7
1,219,677	+	deoA	Shewana3_1042	0.55	+1.6
1,219,753	-	deoA	Shewana3_1042	0.61	-0.2
1,219,757	+	deoA	Shewana3_1042	0.61	+0.2
1,219,824	+	deoA	Shewana3_1042	0.66	+1.1
1,220,002	+	deoA	Shewana3_1042	0.79	+0.9
1,220,019	-	deoA	Shewana3_1042	0.81	-0.4
1,220,091	-	deoA	Shewana3_1042	0.86	-1.9
1,220,099	+	deoA	Shewana3_1042	0.87	+0.6
1,220,159	+				+0.9
1,220,243	+				+1.2
1,220,306	-				-1.2
1,220,458	+		Shewana3_1043	0.14	+0.8
1,220,471	-		Shewana3_1043	0.15	-2.0
1,220,632	+		Shewana3_1043	0.28	+1.1
1,220,760	+		Shewana3_1043	0.39	+1.1
1,220,763	+		Shewana3_1043	0.39	+1.2
1,220,892	+		Shewana3_1043	0.50	+1.2
1,221,280	-		Shewana3_1043	0.82	+2.0
1,221,836	+	deoD	Shewana3_1044	0.34	+0.7
1,221,884	+	deoD	Shewana3_1044	0.41	+0.9
1,222,020	+	deoD	Shewana3_1044	0.60	+0.9
1,222,076	-				+3.0
1,222,144	+	deoD	Shewana3_1044	0.78	+1.3
1,222,442	-				+0.8