Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0931

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,087,697	+		Shewana3_0930	0.28	-0.1
1,087,780	+		Shewana3_0930	0.35	+0.3
1,087,881	+		Shewana3_0930	0.43	+0.1
1,087,907	-		Shewana3_0930	0.45	-0.0
1,088,030	-		Shewana3_0930	0.54	-0.5
1,088,070	+		Shewana3_0930	0.57	+0.6
1,088,074	-		Shewana3_0930	0.57	-2.1
1,088,125	+		Shewana3_0930	0.61	+0.9
1,088,187	+		Shewana3_0930	0.66	-1.5
1,088,194	-		Shewana3_0930	0.67	+0.4
1,088,345	-		Shewana3_0930	0.78	+0.5
1,088,373	+		Shewana3_0930	0.81	+0.6
1,088,381	-		Shewana3_0930	0.81	+0.0
1,088,587	-				-0.9
1,088,678	-				+0.4
1,088,736	-				+0.8
1,088,836	-				+0.8
1,088,846	+				-1.7
1,088,988	+				-1.2
1,089,015	-		Shewana3_0931	0.10	-0.1
1,089,100	+		Shewana3_0931	0.13	-0.3
1,089,100	+		Shewana3_0931	0.13	-1.8
1,089,190	+		Shewana3_0931	0.16	-1.4
1,089,198	-		Shewana3_0931	0.16	+0.5
1,089,332	+		Shewana3_0931	0.20	+0.2
1,089,337	+		Shewana3_0931	0.20	-0.5
1,089,345	-		Shewana3_0931	0.21	+0.7
1,089,577	-		Shewana3_0931	0.28	+0.3
1,089,911	-		Shewana3_0931	0.39	+0.6
1,090,072	+		Shewana3_0931	0.44	-0.5
1,090,072	+		Shewana3_0931	0.44	-1.3
1,090,172	-		Shewana3_0931	0.47	-0.4
1,090,342	+		Shewana3_0931	0.52	-0.3
1,090,502	+		Shewana3_0931	0.57	-0.6
1,090,502	+		Shewana3_0931	0.57	-0.8
1,090,510	-		Shewana3_0931	0.58	+0.8
1,090,510	-		Shewana3_0931	0.58	+0.1
1,090,520	-		Shewana3_0931	0.58	+0.3
1,090,568	-		Shewana3_0931	0.59	+0.4
1,090,606	+		Shewana3_0931	0.61	-0.3
1,090,615	-		Shewana3_0931	0.61	-0.2
1,090,708	+		Shewana3_0931	0.64	-2.5
1,090,708	+		Shewana3_0931	0.64	-0.9
1,090,941	+		Shewana3_0931	0.71	-1.1
1,090,949	-		Shewana3_0931	0.72	-0.9
1,091,040	-		Shewana3_0931	0.74	-0.0
1,091,080	+		Shewana3_0931	0.76	-0.4
1,091,080	+		Shewana3_0931	0.76	+0.6
1,091,171	+		Shewana3_0931	0.79	-0.1
1,091,291	+		Shewana3_0931	0.82	-0.4
1,091,298	-		Shewana3_0931	0.83	-0.9
1,091,299	-		Shewana3_0931	0.83	-0.3
1,091,299	-		Shewana3_0931	0.83	+0.9
1,091,325	+		Shewana3_0931	0.84	+0.9
1,091,335	+		Shewana3_0931	0.84	-1.4
1,091,335	+		Shewana3_0931	0.84	-2.0
1,091,343	-		Shewana3_0931	0.84	-1.4
1,091,403	+		Shewana3_0931	0.86	-0.5
1,091,408	+		Shewana3_0931	0.86	-0.0
1,091,556	-				+0.3
1,091,678	+				+0.9
1,091,757	-				-1.1
1,091,816	-				-1.0
1,091,818	+				+0.0
1,091,831	-				-0.9
1,092,039	+				-1.2
1,092,420	+		Shewana3_0932	0.33	-0.4
1,092,428	-		Shewana3_0932	0.33	+0.1
1,092,689	+		Shewana3_0932	0.56	-1.1
1,092,749	+		Shewana3_0932	0.62	-1.0