Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0711

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
824,454	-		Shewana3_0709	0.18	+0.5
824,581	-		Shewana3_0709	0.37	+0.4
824,726	+		Shewana3_0709	0.58	+0.2
824,798	-		Shewana3_0709	0.68	+0.0
824,855	+		Shewana3_0709	0.77	-1.5
824,855	+		Shewana3_0709	0.77	-0.5
824,863	-		Shewana3_0709	0.78	-1.0
825,111	-		Shewana3_0710	0.26	-1.2
825,253	+		Shewana3_0710	0.70	+0.2
825,436	+				-1.6
825,444	-				-0.9
825,452	-				-0.1
825,489	+		Shewana3_0711	0.10	-1.9
825,525	-		Shewana3_0711	0.13	-0.3
825,560	+		Shewana3_0711	0.16	-1.2
825,920	+		Shewana3_0711	0.45	-0.5
826,047	+		Shewana3_0711	0.56	+0.5
826,047	-		Shewana3_0711	0.56	-3.3
826,085	+		Shewana3_0711	0.59	+0.4
826,224	-		Shewana3_0711	0.70	-0.1
826,249	-		Shewana3_0711	0.72	-0.9
826,249	-		Shewana3_0711	0.72	-1.2
826,263	-		Shewana3_0711	0.73	-0.9
826,277	+		Shewana3_0711	0.74	-1.7
826,332	+		Shewana3_0711	0.79	-1.4
826,387	-		Shewana3_0711	0.83	+0.4
826,405	-		Shewana3_0711	0.85	+0.5
826,446	-		Shewana3_0711	0.88	-2.7
826,456	+		Shewana3_0711	0.89	-1.7
826,464	-		Shewana3_0711	0.89	-0.3
826,466	+		Shewana3_0711	0.90	-1.9
826,466	+		Shewana3_0711	0.90	-0.6
826,467	-		Shewana3_0711	0.90	-1.2
826,474	-				-1.0
826,491	+				-3.0
826,491	+				-0.4
826,491	-				-0.3
826,494	-				-0.6
826,496	+				-1.4
826,499	-				-0.7
826,499	-				-0.1
826,499	-				-1.6
826,506	+				-0.1
826,506	+				-1.0
826,506	+				-0.8
826,514	-				-1.0
826,514	-				-2.0
826,515	+				+0.4
826,515	+				-0.8
826,515	+				-1.2
826,522	-				-0.4
826,523	-				+0.2
826,523	-				+0.3
826,536	-				-1.9
826,538	+				-1.0
826,539	+				-2.8
826,561	+				+0.9
826,572	+				-0.5
826,572	+				-0.1
826,580	-				-1.9
826,580	-				-1.2
826,580	-				-0.9
826,580	-				-2.7
826,580	-				+0.3
826,580	-				-0.6
826,589	+				-0.8
826,662	+				-0.2
826,662	+				-1.5
826,662	+				-2.0
826,662	+				-1.1
826,693	+				-1.0
826,693	+				-0.9
826,693	+				-1.4
826,693	+				-0.1
826,701	-				+0.0
826,701	-				-0.2
826,701	-				+0.3
826,701	-				-0.6
826,891	-				-1.1
826,906	+				-1.5
826,906	+				-1.0
826,906	+				-1.2
826,906	+				-0.6
826,906	+				+1.0
826,906	+				-1.5
826,906	+				-1.0
826,914	-				-2.1
826,914	-				-1.4
826,914	-				+0.2
826,914	-				-1.3
826,914	-				-1.4
826,914	-				-0.1
826,941	-				-0.2
826,964	+				-0.4
826,966	+				-1.2
826,974	-				-0.8
827,052	+				+0.2
827,052	+				+0.2
827,123	-				+0.2
827,279	+				-0.5
827,279	+				-0.2
827,280	+				+0.6
827,282	-				+0.8
827,298	+				-0.4
827,301	-				+0.8
827,306	-				+0.8
827,306	-				+0.7
827,322	+				+0.4
827,334	+				-0.1
827,337	-				+0.8
827,337	-				+1.3
827,337	-				+0.7
827,337	-				+0.5
827,341	-				+1.0
827,342	-				+0.7
827,356	-				+0.6
827,361	-				+1.2
827,367	+				-0.0
827,405	+				-0.4
827,480	+		Shewana3_0712	0.11	-0.1
827,488	-		Shewana3_0712	0.12	+1.1
827,488	-		Shewana3_0712	0.12	+0.5
827,488	-		Shewana3_0712	0.12	+0.2
827,490	+		Shewana3_0712	0.12	-5.2
827,498	-		Shewana3_0712	0.12	+1.1
827,541	-		Shewana3_0712	0.14	-0.1