Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rplM and rpsI are separated by 14 nucleotides rpsI and Shewana3_0694 are separated by 113 nucleotides Shewana3_0694 and Shewana3_0695 are separated by 66 nucleotides
Shewana3_0692: rplM - 50S ribosomal protein L13 (RefSeq), at 809,168 to 809,596
rplM
Shewana3_0693: rpsI - 30S ribosomal protein S9 (RefSeq), at 809,611 to 810,003
rpsI
Shewana3_0694: Shewana3_0694 - hypothetical protein (RefSeq), at 810,117 to 810,305
_0694
Shewana3_0695: Shewana3_0695 - adenylosuccinate synthetase (RefSeq), at 810,372 to 811,667
_0695
Position (kb) 810
811 Strain fitness (log2 ratio) -1
0
1
2 at 810.099 kb on + strand at 810.121 kb on + strand at 810.248 kb on - strand, within Shewana3_0694 at 810.279 kb on - strand, within Shewana3_0694 at 810.390 kb on + strand at 810.689 kb on + strand, within Shewana3_0695 at 810.706 kb on + strand, within Shewana3_0695 at 810.716 kb on - strand, within Shewana3_0695 at 810.788 kb on + strand, within Shewana3_0695 at 810.827 kb on + strand, within Shewana3_0695 at 811.278 kb on + strand, within Shewana3_0695
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 810,099 + -0.2 810,121 + -0.4 810,248 - Shewana3_0694 0.69 -0.4 810,279 - Shewana3_0694 0.86 -1.2 810,390 + +0.1 810,689 + Shewana3_0695 0.24 +1.1 810,706 + Shewana3_0695 0.26 +0.4 810,716 - Shewana3_0695 0.27 +1.8 810,788 + Shewana3_0695 0.32 +0.8 810,827 + Shewana3_0695 0.35 +0.8 811,278 + Shewana3_0695 0.70 +1.4
Or see this region's nucleotide sequence