Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0324

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
357,326	+		Shewana3_0322	0.52	-0.3
357,331	+		Shewana3_0322	0.53	+0.1
357,339	+		Shewana3_0322	0.54	+0.8
357,339	+		Shewana3_0322	0.54	+0.2
357,439	+		Shewana3_0322	0.69	+0.6
357,447	-		Shewana3_0322	0.71	-1.8
357,508	+		Shewana3_0322	0.80	-0.9
357,565	+		Shewana3_0322	0.89	+0.6
357,569	-		Shewana3_0322	0.89	-0.6
357,664	+				+0.4
357,727	+				-0.6
357,727	+				-0.0
357,825	+				-2.0
357,868	-				+0.1
357,982	-		Shewana3_0323	0.33	-0.1
357,995	+		Shewana3_0323	0.36	-0.3
358,001	-		Shewana3_0323	0.38	+0.1
358,003	-		Shewana3_0323	0.38	+0.1
358,003	-		Shewana3_0323	0.38	-0.3
358,043	-		Shewana3_0323	0.47	+0.4
358,078	+		Shewana3_0323	0.56	+0.2
358,115	-		Shewana3_0323	0.64	+0.1
358,154	+		Shewana3_0323	0.73	-1.6
358,154	+		Shewana3_0323	0.73	-0.4
358,197	+		Shewana3_0323	0.83	-2.7
358,205	-		Shewana3_0323	0.85	+0.2
358,207	-		Shewana3_0323	0.85	-0.3
358,207	-		Shewana3_0323	0.85	+0.2
358,356	-				+0.6
358,374	-		Shewana3_0324	0.10	-1.1
358,397	+		Shewana3_0324	0.15	-2.5
358,410	-		Shewana3_0324	0.18	-0.4
358,423	-		Shewana3_0324	0.21	+0.9
358,438	+		Shewana3_0324	0.24	-2.3
358,438	+		Shewana3_0324	0.24	-2.4
358,446	-		Shewana3_0324	0.26	-2.0
358,447	-		Shewana3_0324	0.26	+0.5
358,628	+		Shewana3_0324	0.64	-0.2
358,636	-		Shewana3_0324	0.65	-0.8
358,664	-		Shewana3_0324	0.71	-1.8
358,751	-		Shewana3_0324	0.90	-2.6
358,759	-				+0.5
358,759	-				-3.6
358,759	-				-2.8
358,796	-				-1.1
358,798	+				-3.4
358,798	+				-3.2
358,802	+				-3.1
358,806	-				-0.5
358,821	+				-2.6
358,840	-				-0.9
358,849	+				-1.5
358,849	+				-0.9
358,897	+				+0.2
359,004	+				-2.7
359,015	+				-1.1
359,024	+				-3.4
359,060	+				-2.9
359,067	+				+0.7
359,071	+				-0.1
359,073	+				-1.4
359,074	+				-0.4
359,074	+				-1.4
359,074	+				-1.8
359,074	+				+0.0
359,074	+				-0.7
359,074	+				-2.3
359,074	+				-0.9
359,074	+				-2.9
359,074	+				-0.8
359,081	+				-1.0
359,082	-				-0.2
359,084	+				-2.8
359,084	+				-0.7
359,084	+				-1.2
359,086	+				-0.5
359,089	-				+0.5
359,089	-				-1.0
359,092	-				-0.3
359,092	-				-0.7
359,092	-				-0.7
359,094	-				-2.7
359,094	-				-1.5
359,104	-				-0.3
359,114	+				-1.4
359,200	-				-0.2
359,200	-				+0.8
359,211	+				-0.0
359,211	+				-0.3
359,211	+				-0.4
359,219	-				+0.2
359,219	-				-0.5
359,219	-				-2.2
359,226	+				+0.0
359,250	+				+0.2
359,268	-				-0.5
359,329	+				+0.1
359,329	+				+0.1
359,337	-				+0.2
359,397	+				+0.5
359,399	+				+0.3
359,399	+				+0.4
359,399	+				+0.1
359,407	-				-1.1
359,422	+				+0.6
359,425	-				+0.3
359,434	+				+0.3
359,489	+				+0.5
359,497	-				-2.5
359,532	-				-0.5
359,550	+				+0.5
359,556	+				+0.4
359,571	+				+0.2
359,579	-				-0.5
359,579	-				-0.2
359,579	-				-0.7
359,611	-				-2.0
359,616	-				-1.7
359,618	+				+0.4
359,633	-				-2.5
359,633	-				-1.7
359,638	+				+0.7
359,705	+				-0.5
359,713	-				+0.7