Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt moaC and Shewana3_0276 are separated by 19 nucleotides Shewana3_0276 and Shewana3_0277 are separated by 1 nucleotides Shewana3_0277 and Shewana3_0278 are separated by 39 nucleotides Shewana3_0278 and Shewana3_0279 are separated by 8 nucleotides Shewana3_0279 and Shewana3_0280 overlap by 20 nucleotides
Shewana3_0275: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 310,891 to 311,370
moaC
Shewana3_0276: Shewana3_0276 - molybdopterin synthase subunit MoaD (RefSeq), at 311,390 to 311,641
_0276
Shewana3_0277: Shewana3_0277 - molybdopterin synthase subunit MoaE (RefSeq), at 311,643 to 312,110
_0277
Shewana3_0278: Shewana3_0278 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 312,150 to 312,953
_0278
Shewana3_0279: Shewana3_0279 - molybdate ABC transporter, inner membrane subunit (RefSeq), at 312,962 to 313,642
_0279
Shewana3_0280: Shewana3_0280 - ABC transporter related (RefSeq), at 313,623 to 314,726
_0280
Position (kb) 312
313 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 311.189 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.197 kb on - strand, within moaC at 311.197 kb on - strand, within moaC at 311.197 kb on - strand, within moaC at 311.197 kb on - strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.288 kb on - strand, within moaC at 311.288 kb on - strand, within moaC at 311.288 kb on - strand, within moaC at 311.288 kb on - strand, within moaC at 311.355 kb on + strand at 311.355 kb on + strand at 311.363 kb on - strand at 311.528 kb on + strand, within Shewana3_0276 at 311.680 kb on + strand at 311.784 kb on - strand, within Shewana3_0277 at 311.798 kb on - strand, within Shewana3_0277 at 311.805 kb on - strand, within Shewana3_0277 at 311.821 kb on - strand, within Shewana3_0277 at 311.881 kb on - strand, within Shewana3_0277 at 311.950 kb on - strand, within Shewana3_0277 at 312.041 kb on + strand, within Shewana3_0277 at 312.105 kb on + strand at 312.214 kb on + strand at 312.222 kb on - strand at 312.252 kb on - strand, within Shewana3_0278 at 312.283 kb on + strand, within Shewana3_0278 at 312.519 kb on + strand, within Shewana3_0278 at 312.527 kb on - strand, within Shewana3_0278 at 312.606 kb on - strand, within Shewana3_0278 at 312.606 kb on - strand, within Shewana3_0278 at 312.783 kb on + strand, within Shewana3_0278 at 312.797 kb on - strand, within Shewana3_0278 at 312.939 kb on - strand at 312.954 kb on + strand at 312.954 kb on + strand at 313.078 kb on + strand, within Shewana3_0279 at 313.078 kb on + strand, within Shewana3_0279 at 313.085 kb on + strand, within Shewana3_0279 at 313.086 kb on - strand, within Shewana3_0279 at 313.086 kb on - strand, within Shewana3_0279 at 313.086 kb on - strand, within Shewana3_0279 at 313.086 kb on - strand, within Shewana3_0279 at 313.178 kb on - strand, within Shewana3_0279 at 313.302 kb on + strand, within Shewana3_0279 at 313.302 kb on + strand, within Shewana3_0279 at 313.435 kb on + strand, within Shewana3_0279 at 313.511 kb on + strand, within Shewana3_0279 at 313.553 kb on + strand, within Shewana3_0279 at 313.621 kb on + strand at 313.680 kb on - strand at 313.798 kb on + strand, within Shewana3_0280 at 313.798 kb on + strand, within Shewana3_0280 at 313.798 kb on + strand, within Shewana3_0280 at 313.806 kb on - strand, within Shewana3_0280
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 311,189 + moaC Shewana3_0275 0.62 -0.9 311,189 + moaC Shewana3_0275 0.62 -0.8 311,189 + moaC Shewana3_0275 0.62 -1.2 311,189 + moaC Shewana3_0275 0.62 -0.2 311,197 - moaC Shewana3_0275 0.64 -1.5 311,197 - moaC Shewana3_0275 0.64 -1.9 311,197 - moaC Shewana3_0275 0.64 -4.2 311,197 - moaC Shewana3_0275 0.64 -1.4 311,280 + moaC Shewana3_0275 0.81 +0.0 311,280 + moaC Shewana3_0275 0.81 -0.5 311,280 + moaC Shewana3_0275 0.81 +0.4 311,280 + moaC Shewana3_0275 0.81 -0.6 311,280 + moaC Shewana3_0275 0.81 -0.6 311,280 + moaC Shewana3_0275 0.81 +0.9 311,280 + moaC Shewana3_0275 0.81 -0.4 311,280 + moaC Shewana3_0275 0.81 -0.3 311,280 + moaC Shewana3_0275 0.81 -0.3 311,288 - moaC Shewana3_0275 0.83 -1.3 311,288 - moaC Shewana3_0275 0.83 -2.0 311,288 - moaC Shewana3_0275 0.83 -3.4 311,288 - moaC Shewana3_0275 0.83 -2.2 311,355 + +1.2 311,355 + +0.0 311,363 - -2.8 311,528 + Shewana3_0276 0.55 +0.3 311,680 + +0.3 311,784 - Shewana3_0277 0.30 -0.2 311,798 - Shewana3_0277 0.33 -0.8 311,805 - Shewana3_0277 0.35 -2.1 311,821 - Shewana3_0277 0.38 -0.2 311,881 - Shewana3_0277 0.51 -1.9 311,950 - Shewana3_0277 0.66 -1.0 312,041 + Shewana3_0277 0.85 +0.5 312,105 + -0.1 312,214 + +0.2 312,222 - -1.2 312,252 - Shewana3_0278 0.13 -1.7 312,283 + Shewana3_0278 0.17 -0.2 312,519 + Shewana3_0278 0.46 +0.4 312,527 - Shewana3_0278 0.47 -0.8 312,606 - Shewana3_0278 0.57 -1.7 312,606 - Shewana3_0278 0.57 -2.8 312,783 + Shewana3_0278 0.79 +0.5 312,797 - Shewana3_0278 0.80 +0.2 312,939 - -0.6 312,954 + -0.6 312,954 + +0.1 313,078 + Shewana3_0279 0.17 +0.3 313,078 + Shewana3_0279 0.17 +0.1 313,085 + Shewana3_0279 0.18 +0.0 313,086 - Shewana3_0279 0.18 -0.8 313,086 - Shewana3_0279 0.18 -0.0 313,086 - Shewana3_0279 0.18 -0.9 313,086 - Shewana3_0279 0.18 -1.2 313,178 - Shewana3_0279 0.32 -1.1 313,302 + Shewana3_0279 0.50 -0.3 313,302 + Shewana3_0279 0.50 -1.2 313,435 + Shewana3_0279 0.69 +0.3 313,511 + Shewana3_0279 0.81 -1.0 313,553 + Shewana3_0279 0.87 +0.1 313,621 + -0.4 313,680 - -3.0 313,798 + Shewana3_0280 0.16 -0.1 313,798 + Shewana3_0280 0.16 -0.1 313,798 + Shewana3_0280 0.16 -0.5 313,806 - Shewana3_0280 0.17 -2.6
Or see this region's nucleotide sequence